RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 LRRC52Q8N7C0 313 aa21.73■■□□□ 1.07
SQSTM1-215ENST00000514093 RASSF8Q8NHQ8 419 aa21.73■■□□□ 1.07
SQSTM1-215ENST00000514093 MYLPFQ96A32 169 aa21.73■■□□□ 1.07
SQSTM1-215ENST00000514093 ST6GALNAC4Q9H4F1 302 aa21.73■■□□□ 1.07
SQSTM1-215ENST00000514093 CFAP97Q9P2B7 532 aa21.73■■□□□ 1.07
SQSTM1-215ENST00000514093 GOLGA8IPA6NC78 632 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 ZNF840PA6NDX5 716 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 GOLGA8JA6NMD2 632 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 SERPINF2P08697 491 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 CD59P13987 128 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 SLC7A9P82251 487 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 GRIN1Q05586 938 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 SCAPQ12770 1279 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 BYSLQ13895 437 aaKnown RBP21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 POSTNQ15063 836 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 C4orf50Q6ZRC1 276 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 DENND5BQ6ZUT9 1274 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 RAB44Q7Z6P3 723 aaPredicted RBP21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 SFR1Q86XK3 245 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 BRSK2Q8IWQ3 736 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 TOP6BLQ8N6T0 577 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 NOC3LQ8WTT2 800 aaKnown RBP21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 CACTINQ8WUQ7 758 aaKnown RBP21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 ERLEC1Q96DZ1 483 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 SPATA17Q96L03 361 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 AK8Q96MA6 479 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 SYT15Q9BQS2 421 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 CAPN10Q9HC96 672 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 CRTAC1Q9NQ79 661 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 RBAKQ9NYW8 714 aaPredicted RBP21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 TBC1D7Q9P0N9 293 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 SIX4Q9UIU6 781 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 GPSM3Q9Y4H4 160 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 ADAMTS20P59510 1910 aa21.72■■□□□ 1.07
SQSTM1-215ENST00000514093 MYOFQ9NZM1 2061 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 A0A0A0MRY4 1105 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 AP5Z1O43299 807 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 PDGFRBP09619 1106 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 ADH5P11766 374 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 GRIA2P42262 883 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 DPP6P42658 865 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 RBP5P82980 135 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 CYP27A1Q02318 531 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 HSF5Q4G112 596 aaPredicted RBP21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 SOWAHCQ53LP3 525 aaPredicted RBP21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 DYMQ7RTS9 669 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 NAT16Q8N8M0 369 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 PNPLA1Q8N8W4 532 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 CEP76Q8TAP6 659 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 LARP4BQ92615 738 aaKnown RBP21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 ITGA11Q9UKX5 1188 aa21.71■■□□□ 1.07
SQSTM1-215ENST00000514093 SLC9A3R1O14745 358 aaPredicted RBP21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 SLC26A4O43511 780 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 ANXA13P27216 316 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 WASP42768 502 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 TNFRSF4P43489 277 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 ZNF33AQ06730 810 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 ZNF423Q2M1K9 1284 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 LY6G5CQ5SRR4 150 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 PDZD3Q86UT5 571 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 KRI1Q8N9T8 703 aaKnown RBP21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 KBTBD7Q8WVZ9 684 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 MTMR12Q9C0I1 747 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 PDE11AQ9HCR9 933 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 CALCOCO1Q9P1Z2 691 aa21.7■■□□□ 1.06
SQSTM1-215ENST00000514093 TBC1D3BA6NDS4 549 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 ARHGAP33O14559 1287 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 SH3BP5O60239 455 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 PPP1R37O75864 691 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 ADH1CP00326 375 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 PFKLP17858 780 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 GABRG2P18507 467 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 HOXD12P35452 270 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 EIF2DP41214 584 aaKnown RBP21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 IFRD2Q12894 506 aaPredicted RBP21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 COL28A1Q2UY09 1125 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 VSTM1Q6UX27 236 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 PHTF2Q8N3S3 785 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 MRPL44Q9H9J2 332 aaKnown RBP21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 CDH9Q9ULB4 789 aa21.69■■□□□ 1.06
SQSTM1-215ENST00000514093 CEP192Q8TEP8 1941 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 F8VP50 259 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 OLFM2O95897 454 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 MBL2P11226 248 aaPredicted RBP21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 DDIT3P35638 169 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 TAF10Q12962 218 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 TRIP6Q15654 476 aaKnown RBP21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 SLC41A1Q8IVJ1 513 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 ZNF513Q8N8E2 541 aaPredicted RBP21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 PCED1BQ96HM7 432 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 TTLL2Q9BWV7 592 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 STRA6Q9BX79 667 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 PCIF1Q9H4Z3 704 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 PLXND1Q9Y4D7 1925 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 PCDH15Q96QU1 1955 aa21.68■■□□□ 1.06
SQSTM1-215ENST00000514093 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.67■■□□□ 1.06
SQSTM1-215ENST00000514093 OAS1P00973 400 aaKnown RBP21.67■■□□□ 1.06
SQSTM1-215ENST00000514093 TMEM191BP0C7N4 346 aa21.67■■□□□ 1.06
SQSTM1-215ENST00000514093 SLC36A4Q6YBV0 504 aa21.67■■□□□ 1.06
SQSTM1-215ENST00000514093 HVCN1Q96D96 273 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms