RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 RNF135Q8IUD6 432 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 TXLNBQ8N3L3 684 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 DDX1Q92499 740 aaKnown RBP10.72□□□□□ -0.69
NEDD9-214ENST00000513989 CASP10Q92851 521 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 PDLIM2Q96JY6 352 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 SPATA17Q96L03 361 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 ZNF512Q96ME7 567 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-214ENST00000513989 LPIN3Q9BQK8 851 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 CSNK1G1Q9HCP0 422 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 PNPLA8Q9NP80 782 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 ACP6Q9NPH0 428 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 CYLDQ9NQC7 956 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 ST7Q9NRC1 585 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 COMMD8Q9NX08 183 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 ADAMTS1Q9UHI8 967 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 FAM50BQ9Y247 325 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 SPTBN4Q9H254 2564 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 TDRD15B5MCY1 1934 aaKnown RBP10.72□□□□□ -0.69
NEDD9-214ENST00000513989 XPO1O14980 1071 aaKnown RBP10.71□□□□□ -0.69
NEDD9-214ENST00000513989 XYLBO75191 536 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 RTN3O95197 1032 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-214ENST00000513989 HNRNPA1P09651 372 aaKnown RBP eCLIP10.71□□□□□ -0.69
NEDD9-214ENST00000513989 SPATA31D3P0C874 917 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 GPD2P43304 727 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 NSFP46459 744 aaKnown RBP10.71□□□□□ -0.69
NEDD9-214ENST00000513989 PLXNA3P51805 1871 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 PPM1LQ5SGD2 360 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 HGSNATQ68CP4 663 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 DENND1BQ6P3S1 775 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 WDR59Q6PJI9 974 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 SPATA31D4Q6ZUB0 917 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 PAQR9Q6ZVX9 377 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 ERICH1Q86X53 443 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 GPIHBP1Q8IV16 184 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 LRRC8AQ8IWT6 810 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 NUP93Q8N1F7 819 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 IPO4Q8TEX9 1081 aaKnown RBP10.71□□□□□ -0.69
NEDD9-214ENST00000513989 SLC22A17Q8WUG5 538 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 SLC20A1Q8WUM9 679 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 SLC35F5Q8WV83 523 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 SECISBP2LQ93073 1101 aaKnown RBP10.71□□□□□ -0.69
NEDD9-214ENST00000513989 VCPIP1Q96JH7 1222 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 PPP1R13BQ96KQ4 1090 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 PPP1R9BQ96SB3 815 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 FBXO44Q9H4M3 255 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 LRRC4Q9HBW1 653 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 DZANK1Q9NVP4 752 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 ZDHHC7Q9NXF8 308 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 ARHGAP20Q9P2F6 1191 aa10.71□□□□□ -0.69
NEDD9-214ENST00000513989 ZFHX2Q9C0A1 2572 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-214ENST00000513989 LOC730098B7Z3J9 87 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 F8VP50 259 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 RTN2O75298 545 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 FBXO21O94952 628 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CALCAP01258 141 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CALB1P05937 261 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 C8AP07357 584 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CSH1P0DML2 217 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CSH2P0DML3 217 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 HOXB8P17481 243 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CHRNB2P17787 502 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CDH5P33151 784 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-214ENST00000513989 PLA2G4AP47712 749 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 KRT83P78385 493 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 FMO1Q01740 532 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 PDE4CQ08493 712 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 TWF1Q12792 350 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CBX2Q14781 532 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-214ENST00000513989 SLC18A3Q16572 532 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 DDR2Q16832 855 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CLEC16AQ2KHT3 1053 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CCDC122Q5T0U0 273 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 NAA35Q5VZE5 725 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 ACAD10Q6JQN1 1059 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 LLGL2Q6P1M3 1020 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 ALKBH5Q6P6C2 394 aaKnown RBP10.7□□□□□ -0.7
NEDD9-214ENST00000513989 TMEM184AQ6ZMB5 413 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CLEC20AQ6ZU45 233 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 DENND5BQ6ZUT9 1274 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 TTC30AQ86WT1 665 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 ZDHHC17Q8IUH5 632 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 PASD1Q8IV76 773 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 SIX6OS1Q8N1H7 587 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 SLC7A14Q8TBB6 771 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CPA5Q8WXQ8 436 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 KCTD13Q8WZ19 329 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 SUSD6Q92537 303 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 GOLGA1Q92805 767 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 C18orf8Q96DM3 657 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 TRIM11Q96F44 468 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 KCNK16Q96T55 309 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 CHP1Q99653 195 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 SMOQ99835 787 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 MAN1C1Q9NR34 630 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 ADAM22Q9P0K1 906 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 UXTQ9UBK9 157 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-214ENST00000513989 FBXW11Q9UKB1 542 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 STRIP2Q9ULQ0 834 aa10.7□□□□□ -0.7
NEDD9-214ENST00000513989 USP15Q9Y4E8 981 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-214ENST00000513989 HCFC2Q9Y5Z7 792 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms