RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CCDC14Q49A88 953 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 TTMPQ5BVD1 217 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 LHX8Q68G74 356 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 RHBDF2Q6PJF5 856 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 BBS12Q6ZW61 710 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 SCUBE3Q8IX30 993 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 FUKQ8N0W3 1084 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 C3orf58Q8NDZ4 430 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 NKD2Q969F2 451 aaPredicted RBP15.67■□□□□ 0.1
VCAN-211ENST00000513984 NCAPGQ9BPX3 1015 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 FAM118BQ9BPY3 351 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 B3GNT5Q9BYG0 378 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 FRMD8P1Q9BZ68 369 aaPredicted RBP15.67■□□□□ 0.1
VCAN-211ENST00000513984 DNPEPQ9ULA0 475 aa15.67■□□□□ 0.1
VCAN-211ENST00000513984 DRG1Q9Y295 367 aaKnown RBP15.67■□□□□ 0.1
VCAN-211ENST00000513984 ENDOD1O94919 500 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 PTPN1P18031 435 aaKnown RBP15.66■□□□□ 0.1
VCAN-211ENST00000513984 KLRC2P26717 231 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 LHX1P48742 406 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 TAF5Q15542 800 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 OASLQ15646 514 aaKnown RBP15.66■□□□□ 0.1
VCAN-211ENST00000513984 UPP1Q16831 310 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 SH3PXD2AQ5TCZ1 1133 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 ZNF365Q70YC5 407 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 CCDC89Q8N998 374 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 SLC43A3Q8NBI5 491 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 SLAIN1Q8ND83 568 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 ARL8AQ96BM9 186 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 PGBD4Q96DM1 585 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 CFAP57Q96MR6 1250 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 ADAM2Q99965 735 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 DUSP16Q9BY84 665 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 UBN1Q9NPG3 1134 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 PRDM10Q9NQV6 1147 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 PSD3Q9NYI0 1048 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 ATP8A1Q9Y2Q0 1164 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 GOLGA6CA6NDK9 693 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 ATP2C2O75185 946 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 GOLGA6DP0CG33 693 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 CKBP12277 381 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 ATF2P15336 505 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 SDC4P31431 198 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 PTPN9P43378 593 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 PMS2P54278 862 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 VCPP55072 806 aaKnown RBP15.66■□□□□ 0.1
VCAN-211ENST00000513984 CAV1Q03135 178 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 GRIK3Q13003 919 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 SLMAPQ14BN4 828 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 TRAF7Q6Q0C0 670 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 TTC13Q8NBP0 860 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 KCTD6Q8NC69 237 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 SLC35B2Q8TB61 432 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 CCHCR1Q8TD31 782 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 TEKT4Q8WW24 435 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 EPB41L4BQ9H329 900 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 PABPC3Q9H361 631 aaKnown RBP15.66■□□□□ 0.1
VCAN-211ENST00000513984 DDX43Q9NXZ2 648 aaKnown RBP15.66■□□□□ 0.1
VCAN-211ENST00000513984 GOLGA6AQ9NYA3 693 aa15.66■□□□□ 0.1
VCAN-211ENST00000513984 NLRC5Q86WI3 1866 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 PATJQ8NI35 1801 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 CASTOR2A6NHX0 329 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 INPPL1O15357 1258 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 PRPSAP2O60256 369 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 ITGAVP06756 1048 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 CD48P09326 243 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 NPR3P17342 541 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 DESP17661 470 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 ACAT1P24752 427 aaKnown RBP15.65■□□□□ 0.1
VCAN-211ENST00000513984 ARSEP51690 589 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 PLCB3Q01970 1234 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 CDO1Q16878 200 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 RAB6CQ53S08 254 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 KIAA0319Q5VV43 1072 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 PAQR9Q6ZVX9 377 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 ZNF598Q86UK7 904 aaKnown RBP15.65■□□□□ 0.1
VCAN-211ENST00000513984 ALLCQ8N6M5 410 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 SPATA18Q8TC71 538 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 CLEC4CQ8WTT0 213 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 FAM172AQ8WUF8 416 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 HSPH1Q92598 858 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 PKNOX2Q96KN3 472 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 TBCBQ99426 244 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 C11orf84Q9BUA3 381 aaPredicted RBP15.65■□□□□ 0.1
VCAN-211ENST00000513984 RAB6CQ9H0N0 254 aa15.65■□□□□ 0.1
VCAN-211ENST00000513984 HMX1Q9NP08 348 aaPredicted RBP15.65■□□□□ 0.1
VCAN-211ENST00000513984 A0A1W2PQ45 241 aaPredicted RBP15.64■□□□□ 0.09
VCAN-211ENST00000513984 A0A1W2PQY0 241 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 CST8O60676 142 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 NUDT17P0C025 328 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 RARGP13631 454 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 PRMT2P55345 433 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 SLC8A3P57103 927 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 ATP11AP98196 1134 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 ZNF844Q08AG5 666 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 TRIP13Q15645 432 aaPredicted RBP15.64■□□□□ 0.09
VCAN-211ENST00000513984 CCDC142Q17RM4 750 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 BOLA3Q53S33 107 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 CEP85LQ5SZL2 805 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 DSTYKQ6XUX3 929 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 PIGZQ86VD9 579 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms