RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 DNAJC24Q6P3W2 148 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 CNKSR3Q6P9H4 555 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 LYPD8Q6UX82 237 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 CD300LGQ6UXG3 332 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 POLNQ7Z5Q5 900 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 MTERF4Q7Z6M4 381 aaKnown RBP10.4□□□□□ -0.74
TPM3-221ENST00000513769 XYLT1Q86Y38 959 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 DNAAF5Q86Y56 855 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 NPAS4Q8IUM7 802 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 PASD1Q8IV76 773 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 SCML4Q8N228 414 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 C12orf29Q8N999 325 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 EIF1ADQ8N9N8 165 aaKnown RBP10.4□□□□□ -0.74
TPM3-221ENST00000513769 RNF169Q8NCN4 708 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 COG1Q8WTW3 980 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.4□□□□□ -0.741e-8■■■■■ 76.2
TPM3-221ENST00000513769 GOLGA2P5Q9HBQ8 144 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 PNPLA8Q9NP80 782 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 DDX56Q9NY93 547 aaKnown RBP10.4□□□□□ -0.74
TPM3-221ENST00000513769 STK39Q9UEW8 545 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 FRMPD3Q5JV73 1810 aa10.4□□□□□ -0.75
TPM3-221ENST00000513769 PGRMC1O00264 195 aaKnown RBP10.39□□□□□ -0.75
TPM3-221ENST00000513769 KIAA0355O15063 1070 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 ZNF185O15231 689 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 SART1O43290 800 aaKnown RBP10.39□□□□□ -0.75
TPM3-221ENST00000513769 CEP104O60308 925 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 TADA2AO75478 443 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 FBXO21O94952 628 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 CALCAP01258 141 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 KRT7P08729 469 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 CLTBP09497 229 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 FGFR1P11362 822 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 PCK1P35558 622 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 ZNF143P52747 638 aaPredicted RBP10.39□□□□□ -0.75
TPM3-221ENST00000513769 PDCLQ13371 301 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 PTPN20Q4JDL3 420 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 BOLA3Q53S33 107 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 CLLU1OSQ5K130 101 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 PMF1Q6P1K2 205 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 WDR93Q6P2C0 686 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 MAATS1Q7Z4T9 603 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 UBE2Q1Q7Z7E8 422 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 TMEM199Q8N511 208 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 ZNF511Q8NB15 262 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 EXD1Q8NHP7 514 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 CCDC26Q8TAB7 109 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 UBA3Q8TBC4 463 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 HNRNPLLQ8WVV9 542 aaKnown RBP10.39□□□□□ -0.75
TPM3-221ENST00000513769 TOP1MTQ969P6 601 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 CASD1Q96PB1 797 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 CPXM1Q96SM3 734 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 PRDM16Q9HAZ2 1276 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 CSNK1G1Q9HCP0 422 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 TBC1D13Q9NVG8 400 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 ARGLU1Q9NWB6 273 aaPredicted RBP10.39□□□□□ -0.75
TPM3-221ENST00000513769 RAB21Q9UL25 225 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 MTUS1Q9ULD2 1270 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 FAN1Q9Y2M0 1017 aa10.39□□□□□ -0.75
TPM3-221ENST00000513769 GOLGA6L10A0A0M3HER8 536 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 FSCN2O14926 492 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 ATP8B1O43520 1251 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 NCK2O43639 380 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 DDHD2O94830 711 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 NPR3P17342 541 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 CXCR5P32302 372 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 CTHP32929 405 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 RFC1P35251 1148 aaPredicted RBP10.38□□□□□ -0.75
TPM3-221ENST00000513769 RPL7AP62424 266 aaKnown RBP10.38□□□□□ -0.75
TPM3-221ENST00000513769 YWHAHQ04917 246 aaPredicted RBP10.38□□□□□ -0.75
TPM3-221ENST00000513769 PDE4CQ08493 712 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 MRPL58Q14197 206 aaKnown RBP10.38□□□□□ -0.75
TPM3-221ENST00000513769 BRD3Q15059 726 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 NFE2Q16621 373 aaPredicted RBP10.38□□□□□ -0.75
TPM3-221ENST00000513769 TRIM60Q495X7 471 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 OVOS1Q6IE37 1185 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 MFSD5Q6N075 450 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 CC2D1AQ6P1N0 951 aaPredicted RBP10.38□□□□□ -0.75
TPM3-221ENST00000513769 C4orf50Q6ZRC1 276 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 BEND5Q7L4P6 421 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 TTC30AQ86WT1 665 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 VSIG1Q86XK7 387 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 GPR65Q8IYL9 337 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 KATNAL2Q8IYT4 538 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 DCP1BQ8IZD4 617 aaKnown RBP10.38□□□□□ -0.75
TPM3-221ENST00000513769 FUKQ8N0W3 1084 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 LINC01599Q8WXQ3 324 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 ANKRD7Q92527 254 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 PAWRQ96IZ0 340 aaKnown RBP10.38□□□□□ -0.75
TPM3-221ENST00000513769 CEP295NLQ96MC4 621 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 CNPY3Q9BT09 278 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 TRIM62Q9BVG3 475 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 PRO3102Q9H379 93 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 RNF19AQ9NV58 838 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 RRN3Q9NYV6 651 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 HMGXB4Q9UGU5 601 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 CYTH4Q9UIA0 394 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 NME7Q9Y5B8 376 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 WASF2Q9Y6W5 498 aa10.38□□□□□ -0.75
TPM3-221ENST00000513769 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 A0A1W2PPC1 479 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms