RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 GRIK1P39086 918 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 PRKCIP41743 596 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 GCGRP47871 477 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 CDR1P51861 262 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 EPHB3P54753 998 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 RBM10P98175 930 aaKnown RBP8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ARID5AQ03989 594 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ITIH3Q06033 890 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 TWF1Q12792 350 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 TBX2Q13207 712 aaPredicted RBP8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ARID5BQ14865 1188 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 SKIV2LQ15477 1246 aaKnown RBP8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ASIC2Q16515 512 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 PKDCCQ504Y2 493 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ANKRD54Q6NXT1 300 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 LCLAT1Q6UWP7 414 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 CYP26C1Q6V0L0 522 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 EP400NLQ6ZTU2 488 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ITIH5Q86UX2 942 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 TTC30AQ86WT1 665 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 SCN4BQ8IWT1 228 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ELMOD1Q8N336 334 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 CMASQ8NFW8 434 aaPredicted RBP8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 MAFAQ8NHW3 353 aaPredicted RBP8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 CPLX3Q8WVH0 158 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 SYN2Q92777 582 aaPredicted RBP8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 C8orf48Q96LL4 319 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ZSWIM1Q9BR11 485 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 DUSP16Q9BY84 665 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 PRKD2Q9BZL6 878 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 CSNK1G1Q9HCP0 422 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ACP6Q9NPH0 428 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 TMEM30AQ9NV96 361 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 EHD2Q9NZN4 543 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 ASB3Q9Y575 518 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 MYOFQ9NZM1 2061 aa8.02□□□□□ -1.13
HMGXB3-204ENST00000513318 MIA3Q5JRA6 1907 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CCDC195A0A1B0GUA6 201 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 AKR1B15C9JRZ8 316 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 XPO1O14980 1071 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CCL16O15467 120 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 SOAT2O75908 522 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 BEST1O76090 585 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 RTN3O95197 1032 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CALCAP01258 141 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CSH1P0DML2 217 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CSH2P0DML3 217 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 HNRNPH3P31942 346 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CDH5P33151 784 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 LTBRP36941 435 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 PLA2G4AP47712 749 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 GPR15P49685 360 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CACNA2D1P54289 1103 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 MAP3K7CLP57077 242 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CDR2Q01850 454 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 DLX2Q07687 328 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 PDE4CQ08493 712 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 KLHL30Q0D2K2 578 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CCDC85BQ15834 202 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 DDR2Q16832 855 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 TDRD12Q587J7 1177 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 E4F1Q66K89 784 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 SYCE2Q6PIF2 218 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 TRIM72Q6ZMU5 477 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 DENND5BQ6ZUT9 1274 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 NYAP1Q6ZVC0 841 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 IRF2BP2Q7Z5L9 587 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 NOP9Q86U38 636 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 DRC7Q8IY82 874 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 SMRP1Q8NCR6 262 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 ZMIZ2Q8NF64 920 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 OR8K1Q8NGG5 319 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 PPM1EQ8WY54 764 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 DDX1Q92499 740 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 SMG7Q92540 1137 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 ANP32BQ92688 251 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 PSMG2Q969U7 264 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 ZNF707Q96C28 371 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 TRMT2BQ96GJ1 504 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 MSLNLQ96KJ4 702 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 SPATA17Q96L03 361 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 ZNF512Q96ME7 567 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 KCNK16Q96T55 309 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 DNAJC7Q99615 494 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 SMOQ99835 787 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 LHX5Q9H2C1 402 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 PDCL3Q9H2J4 239 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 UBE2ZQ9H832 354 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 ABHD10Q9NUJ1 306 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 CLEC1BQ9P126 229 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 IMPACTQ9P2X3 320 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 NOCTQ9UK39 431 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 COG5Q9UP83 839 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 BZW2Q9Y6E2 419 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 C5orf42Q9H799 3197 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 DOCK4Q8N1I0 1966 aa8.01□□□□□ -1.13
HMGXB3-204ENST00000513318 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8□□□□□ -1.13
HMGXB3-204ENST00000513318 SLC38A8A6NNN8 435 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 HHLA1C9JL84 531 aa8□□□□□ -1.13
HMGXB3-204ENST00000513318 LSM8O95777 96 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms