RNA–Protein interactions for RNA: ENST00000512805.5

RACK1-227, Transcript of receptor for activated C kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACK1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-227ENST00000512805 FAM213AQ9BRX8 229 aa11.33□□□□□ -0.6
RACK1-227ENST00000512805 TAB2Q9NYJ8 693 aa11.33□□□□□ -0.6
RACK1-227ENST00000512805 LIMA1Q9UHB6 759 aaKnown RBP11.33□□□□□ -0.6
RACK1-227ENST00000512805 AGO2Q9UKV8 859 aaKnown RBP11.33□□□□□ -0.6
RACK1-227ENST00000512805 HES2Q9Y543 173 aa11.33□□□□□ -0.6
RACK1-227ENST00000512805 PCDHB9Q9Y5E1 797 aa11.33□□□□□ -0.6
RACK1-227ENST00000512805 PCDH15Q96QU1 1955 aa11.33□□□□□ -0.6
RACK1-227ENST00000512805 ARHGEF37A1IGU5 675 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 TEX33O43247 280 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 NPTXRO95502 500 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 DPP6P42658 865 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 IL12RB1P42701 662 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 OSTNP61366 133 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 FANCCQ00597 558 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 NOLC1Q14978 699 aaKnown RBP eCLIP11.32□□□□□ -0.61e-323■■■□□ 18.3
RACK1-227ENST00000512805 ENOX2Q16206 610 aaKnown RBP11.32□□□□□ -0.6
RACK1-227ENST00000512805 PSMD5Q16401 504 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 ZNF568Q3ZCX4 644 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 DPY19L2P1Q6NXN4 242 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 SYT13Q7L8C5 426 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 GPD1LQ8N335 351 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 XXYLT1Q8NBI6 393 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 GOLGA5Q8TBA6 731 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 ZNF516Q92618 1163 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 SLC35C1Q96A29 364 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 RSPRY1Q96DX4 576 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 MSTO1Q9BUK6 570 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 NXF3Q9H4D5 531 aaKnown RBP11.32□□□□□ -0.6
RACK1-227ENST00000512805 UBN1Q9NPG3 1134 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 TOPORSQ9NS56 1045 aaPredicted RBP11.32□□□□□ -0.6
RACK1-227ENST00000512805 GTSE1Q9NYZ3 720 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 CGNQ9P2M7 1197 aaKnown RBP11.32□□□□□ -0.6
RACK1-227ENST00000512805 SLC6A14Q9UN76 642 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 INVSQ9Y283 1065 aa11.32□□□□□ -0.6
RACK1-227ENST00000512805 TDRD15B5MCY1 1934 aaKnown RBP11.31□□□□□ -0.6
RACK1-227ENST00000512805 CETN3O15182 167 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 OGTO15294 1046 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 SLC16A3O15427 465 aaKnown RBP11.31□□□□□ -0.6
RACK1-227ENST00000512805 CLDN3O15551 220 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 EXOC3O60645 756 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 MOSPD3O75425 235 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 GJB3O75712 270 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 ERLIN2O94905 339 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 TRIM49P0CI25 452 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 TRIM49CP0CI26 452 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 MCF2P10911 925 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 ABCD1P33897 745 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 HOXD12P35452 270 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
RACK1-227ENST00000512805 CYP24A1Q07973 514 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 SNRNP35Q16560 246 aaKnown RBP11.31□□□□□ -0.6
RACK1-227ENST00000512805 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 FSTL4Q6MZW2 842 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 SARM1Q6SZW1 724 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 TMC8Q8IU68 726 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 YAF2Q8IY57 180 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 FAM186BQ8IYM0 893 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 MINDY1Q8N5J2 469 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 ZSCAN18Q8TBC5 510 aaPredicted RBP11.31□□□□□ -0.6
RACK1-227ENST00000512805 NOC3LQ8WTT2 800 aaKnown RBP11.31□□□□□ -0.6
RACK1-227ENST00000512805 TTPALQ9BTX7 342 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 CAPN10Q9HC96 672 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 MIOSQ9NXC5 875 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 IFNKQ9P0W0 207 aa11.31□□□□□ -0.6
RACK1-227ENST00000512805 USP9YO00507 2555 aaPredicted RBP11.3□□□□□ -0.6
RACK1-227ENST00000512805 A0A1B0GTH6 734 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 ARL5CA6NH57 179 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 LRRIQ3A6PVS8 624 aaPredicted RBP11.3□□□□□ -0.6
RACK1-227ENST00000512805 N4BP3O15049 544 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 MAPK13O15264 365 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 CBFA2T3O75081 653 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 RPL13P26373 211 aaKnown RBP11.3□□□□□ -0.6
RACK1-227ENST00000512805 AXLP30530 894 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 PSMC2P35998 433 aaKnown RBP11.3□□□□□ -0.6
RACK1-227ENST00000512805 PBX1P40424 430 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 DGKEP52429 567 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 RHDQ02161 417 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 NR1I3Q14994 352 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 PCBP1Q15365 356 aaKnown RBP eCLIP11.3□□□□□ -0.65e-8■□□□□ 10.6
RACK1-227ENST00000512805 SLFN12LQ6IEE8 588 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 NOTUMQ6P988 496 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 SLC27A1Q6PCB7 646 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 MARCH9Q86YJ5 346 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 GALNT15Q8N3T1 639 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 PARD3BQ8TEW8 1205 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 TUBGCP2Q9BSJ2 902 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 GTPBP2Q9BX10 602 aaKnown RBP11.3□□□□□ -0.6
RACK1-227ENST00000512805 XPO4Q9C0E2 1151 aaKnown RBP11.3□□□□□ -0.6
RACK1-227ENST00000512805 VPS16Q9H269 839 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 PDE11AQ9HCR9 933 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
RACK1-227ENST00000512805 SNTG2Q9NY99 539 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 PILRBQ9UKJ0 227 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 IPPQ9Y573 584 aa11.3□□□□□ -0.6
RACK1-227ENST00000512805 SF3B1O75533 1304 aaKnown RBP eCLIP11.3□□□□□ -0.62e-6■■■■■ 109
RACK1-227ENST00000512805 MYH11P35749 1972 aa11.29□□□□□ -0.6
RACK1-227ENST00000512805 GOLGA6L19H0YKK7 550 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms