RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TRMT6Q9UJA5 497 aaKnown RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 TMX2Q9Y320 296 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 ZC3H13Q5T200 1668 aaKnown RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 HEATR9A2RTY3 570 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 H3BQF6 201 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 VWA5AO00534 786 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 PMPCBO75439 489 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 CLK1P49759 484 aaKnown RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 MMP14P50281 582 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 RAP1GDS1P52306 607 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 EZH2Q15910 746 aaKnown RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 SLFN11Q7Z7L1 901 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 ANKRD13AQ8IZ07 590 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 FAM9CQ8IZT9 166 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 RXFP1Q9HBX9 757 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 EIF3LQ9Y262 564 aaKnown RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 PIK3CDO00329 1044 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 FKBP6O75344 327 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 SUPT7LO94864 414 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 FBXO21O94952 628 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 CETPP11597 493 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 PTPN4P29074 926 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 FBXW4P57775 412 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 INTS5Q6P9B9 1019 aaKnown RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 KIAA2013Q8IYS2 634 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 TTC30BQ8N4P2 665 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 FAM172AQ8WUF8 416 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 JADE3Q92613 823 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 INPP5DQ92835 1189 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 PLEKHA8Q96JA3 519 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 IL1RL2Q9HB29 575 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 C2orf81A6NN90 581 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 GMPSP49915 693 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 WASHC5Q12768 1159 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 CRYMQ14894 314 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 C10orf120Q5SQS8 335 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 CINPQ9BW66 212 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 CD248Q9HCU0 757 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 USP18Q9UMW8 372 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 AP4S1Q9Y587 144 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 KCNT1Q5JUK3 1230 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 SEL1L3Q68CR1 1132 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 BNC2Q6ZN30 1099 aaPredicted RBP12.9□□□□□ -0.34
COL11A1-210ENST00000512756 ABRAQ8N0Z2 381 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 RAET1EQ8TD07 263 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 ACER1Q8TDN7 264 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 SGF29Q96ES7 293 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 VCPIP1Q96JH7 1222 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 CAAP1Q9H8G2 361 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 SH3BP1Q9Y3L3 701 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 XPO1O14980 1071 aaKnown RBP12.9□□□□□ -0.34
COL11A1-210ENST00000512756 MRPL28Q13084 256 aaKnown RBP12.9□□□□□ -0.34
COL11A1-210ENST00000512756 ZCWPW2Q504Y3 356 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 CACHD1Q5VU97 1274 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 SV2AQ7L0J3 742 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 DDX53Q86TM3 631 aaKnown RBP12.9□□□□□ -0.34
COL11A1-210ENST00000512756 YAF2Q8IY57 180 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 KIAA0895Q8NCT3 520 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 B4GALNT2Q8NHY0 566 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 TUBGCP3Q96CW5 907 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 MTMR8Q96EF0 704 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 SPATA31A6Q5VVP1 1343 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 LOC102724159A0A0B4J2E5 919 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 PRRG1O14668 218 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 AP1G2O75843 785 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 ARIH2O95376 493 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 RBP1P09455 135 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 NUP107P57740 925 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 PWP2Q15269 919 aaKnown RBP12.9□□□□□ -0.34
COL11A1-210ENST00000512756 TDRD10Q5VZ19 366 aaKnown RBP12.9□□□□□ -0.34
COL11A1-210ENST00000512756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
COL11A1-210ENST00000512756 SLC20A1Q8WUM9 679 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 OTULINQ96BN8 352 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 HIC2Q96JB3 615 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 SPATA16Q9BXB7 569 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 CRLS1Q9UJA2 301 aa12.9□□□□□ -0.34
COL11A1-210ENST00000512756 USP1O94782 785 aa12.9□□□□□ -0.35
COL11A1-210ENST00000512756 OCM2P0CE71 109 aa12.9□□□□□ -0.35
COL11A1-210ENST00000512756 OCMP0CE72 109 aaPredicted RBP12.9□□□□□ -0.35
COL11A1-210ENST00000512756 ETFBP38117 255 aa12.9□□□□□ -0.35
COL11A1-210ENST00000512756 SLC47A2Q86VL8 602 aa12.9□□□□□ -0.35
COL11A1-210ENST00000512756 KCTD10Q9H3F6 313 aa12.9□□□□□ -0.35
COL11A1-210ENST00000512756 CISHQ9NSE2 258 aa12.9□□□□□ -0.35
COL11A1-210ENST00000512756 RUVBL2Q9Y230 463 aaKnown RBP12.9□□□□□ -0.35
COL11A1-210ENST00000512756 NCAM2O15394 837 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 PGK2P07205 417 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 OR1G1P47890 313 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 PPP3CCP48454 512 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 SLC11A2P49281 568 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 AQP5P55064 265 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 EN1Q05925 392 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-210ENST00000512756 DEPDC1Q5TB30 811 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 TTC30AQ86WT1 665 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 MICU2Q8IYU8 434 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 ZNF333Q96JL9 665 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 TMEM121Q9BTD3 319 aa12.89□□□□□ -0.35
COL11A1-210ENST00000512756 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms