RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CTIFO43310 598 aaKnown RBP9.24□□□□□ -0.93
VCAN-208ENST00000512590 ZNF208O43345 1280 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 PTPN7P35236 360 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 PSMC6P62333 389 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 PPIGQ13427 754 aaKnown RBP eCLIP9.24□□□□□ -0.93
VCAN-208ENST00000512590 UBE3CQ15386 1083 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 GOLGA7BQ2TAP0 167 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 ATF7IP2Q5U623 682 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 FAM171A1Q5VUB5 890 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 FAM45BPQ6NSW5 357 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 RETSATQ6NUM9 610 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 RGS9BPQ6ZS82 235 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 EPHX4Q8IUS5 362 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 NPHS2Q9NP85 383 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 FAM49BQ9NUQ9 324 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 PRKAB1Q9Y478 270 aa9.24□□□□□ -0.93
VCAN-208ENST00000512590 ADH1AP07327 375 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 RFC5P40937 340 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 RENBPP51606 427 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 CSTF3Q12996 717 aaKnown RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 PKN2Q16513 984 aaKnown RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 ZC3H18Q86VM9 953 aaKnown RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 P3H2Q8IVL5 708 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 KIRREL3Q8IZU9 778 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 LRRC71Q8N4P6 559 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 HIST1H2AAQ96QV6 131 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 IL12RB2Q99665 862 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 PUS7LQ9H0K6 701 aaKnown RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 VPS45Q9NRW7 570 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 SMPD4Q9NXE4 827 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 ZNF624Q9P2J8 865 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 PCDHGA3Q9Y5H0 932 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 CACNB4O00305 520 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 IGF2BP3O00425 579 aaKnown RBP eCLIP9.23□□□□□ -0.93
VCAN-208ENST00000512590 KCNN4O15554 427 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 FGBP02675 491 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 MYBL1P10243 752 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 VAV1P15498 845 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 ALAS2P22557 587 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 RAB27AP51159 221 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 KCNK10P57789 538 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 OC90Q02509 493 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 P3H1Q32P28 736 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 PLPP4Q5VZY2 271 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 RASGRP3Q8IV61 690 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 BACH2Q9BYV9 841 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 RPH3AQ9Y2J0 694 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 HBS1LQ9Y450 684 aaKnown RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 PIK3C2GO75747 1445 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 PDHXO00330 501 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 GIMD1P0DJR0 217 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 GDI2P50395 445 aaKnown RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 MYBPC1Q00872 1141 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 SGCBQ16585 318 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 CYP2A13Q16696 494 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 TFDP3Q5H9I0 405 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 EFHC1Q5JVL4 640 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 RHOT2Q8IXI1 618 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 TTC29Q8NA56 475 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 CCDC197Q8NCU1 140 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 ZNF483Q8TF39 744 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 MTERF3Q96E29 417 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 LXNQ9BS40 222 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 RNF112Q9ULX5 631 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 PCDHB5Q9Y5E4 795 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 SPATA31A6Q5VVP1 1343 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 MOXD2PA6NHM9 499 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 AKR1A1P14550 325 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 ATP5JP18859 108 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 CDC27P30260 824 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 SOX11P35716 441 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 NUMBP49757 651 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 CCL23P55773 120 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 RGS1Q08116 209 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 ACSM2AQ08AH3 577 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 HIC1Q14526 733 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 XKR3Q5GH77 459 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 AMIGO1Q86WK6 493 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 CASP10Q92851 521 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 PMM1Q92871 262 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 CDADC1Q9BWV3 514 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D10AQ9BXI6 508 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 ADAM7Q9H2U9 754 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 ZDHHC6Q9H6R6 413 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 WDCPQ9H6R7 721 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 CD209Q9NNX6 404 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 C20orf96Q9NUD7 363 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 ZNF70Q9UC06 446 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 TTC7AQ9ULT0 858 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 UBQLN1Q9UMX0 589 aaKnown RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 ZBTB12Q9Y330 459 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 ZSCAN5CA6NGD5 496 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 ERVV-1B6SEH8 477 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 RBAK-RBAKDNI3L0D1 243 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 NFIBO00712 420 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 SEC24DO94855 1032 aaPredicted RBP9.23□□□□□ -0.93
VCAN-208ENST00000512590 IL1R1P14778 569 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 KELP23276 732 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 CYP51A1Q16850 503 aa9.23□□□□□ -0.93
VCAN-208ENST00000512590 ERO1BQ86YB8 467 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms