RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 NIF3L1Q9GZT8 377 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 FAM107BQ9H098 131 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 IP6K2Q9UHH9 426 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 DMGDHQ9UI17 866 aaKnown RBP10.03□□□□□ -0.8
MSH3-203ENST00000512531 NFU1Q9UMS0 254 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 ADGRA3Q8IWK6 1321 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 NRCAMQ92823 1304 aa10.03□□□□□ -0.8
MSH3-203ENST00000512531 IGKV6-21A0A0C4DH24 114 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 FAM86C2PA6NEL3 165 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 RRN3P2A6NIE6 340 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 DDX3YO15523 660 aaKnown RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 MYZAPP0CAP1 466 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 MCF2P10911 925 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 HARSP12081 509 aaKnown RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 ATP4AP20648 1035 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 COMTP21964 271 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 BMPR1AP36894 532 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 GGCXP38435 758 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 CAV1Q03135 178 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 PTP4A2Q12974 167 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 MRPL58Q14197 206 aaKnown RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 SLMAPQ14BN4 828 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 PLCB4Q15147 1175 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 FAM187BQ17R55 369 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 ZNF699Q32M78 642 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 TCEAL5Q5H9L2 206 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 TDRD10Q5VZ19 366 aaKnown RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 EFCAB12Q6NXP0 572 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 TMEM270Q6UE05 265 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 VASH1Q7L8A9 365 aaPredicted RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 PHF13Q86YI8 300 aaPredicted RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 RHOT1Q8IXI2 618 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 MCOLN2Q8IZK6 566 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 FIBCD1Q8N539 461 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 RBBP8NLQ8NC74 664 aaPredicted RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 MAGOHBQ96A72 148 aaKnown RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 FMO2Q99518 471 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 AP1M1Q9BXS5 423 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 DDX47Q9H0S4 455 aaKnown RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 ASB7Q9H672 318 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 FAM204AQ9H8W3 233 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 RC3H2Q9HBD1 1191 aaKnown RBP10.02□□□□□ -0.81
MSH3-203ENST00000512531 ADAM22Q9P0K1 906 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 WDR35Q9P2L0 1181 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 ANAPC7Q9UJX3 599 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 TNFSF13BQ9Y275 285 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 FAN1Q9Y2M0 1017 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 SQORQ9Y6N5 450 aa10.02□□□□□ -0.81
MSH3-203ENST00000512531 MYO7AQ13402 2215 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 RNF223E7ERA6 249 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 FZD6O60353 706 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 ECEL1O95672 775 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 GLI1P08151 1106 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 UNGP13051 313 aaPredicted RBP10.01□□□□□ -0.81
MSH3-203ENST00000512531 CHRNB2P17787 502 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 MARK3P27448 753 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 HSPA9P38646 679 aaKnown RBP10.01□□□□□ -0.81
MSH3-203ENST00000512531 IFFO1Q0D2I5 559 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 PPP1R7Q15435 360 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 SMAD2Q15796 467 aaKnown RBP10.01□□□□□ -0.81
MSH3-203ENST00000512531 ZNF667Q5HYK9 610 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 ZFYVE27Q5T4F4 411 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 RSPH3Q86UC2 560 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 ZNF410Q86VK4 478 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 CCDC105Q8IYK2 499 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 CASKIN2Q8WXE0 1202 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 ARHGEF26Q96DR7 871 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 RBM41Q96IZ5 413 aaKnown RBP10.01□□□□□ -0.81
MSH3-203ENST00000512531 NLRP4Q96MN2 994 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 TSPAN18Q96SJ8 248 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 PCYT2Q99447 389 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 NCAPGQ9BPX3 1015 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 ERP44Q9BS26 406 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 CCDC113Q9H0I3 377 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 CYP3A43Q9HB55 503 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 TOPORSQ9NS56 1045 aaPredicted RBP10.01□□□□□ -0.81
MSH3-203ENST00000512531 DDX56Q9NY93 547 aaKnown RBP10.01□□□□□ -0.81
MSH3-203ENST00000512531 TAS2R14Q9NYV8 317 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.01□□□□□ -0.81
MSH3-203ENST00000512531 PCYOX1Q9UHG3 505 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 CNTN6Q9UQ52 1028 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.01□□□□□ -0.81
MSH3-203ENST00000512531 DOCK5Q9H7D0 1870 aa10.01□□□□□ -0.81
MSH3-203ENST00000512531 TTC3P53804 2025 aa10□□□□□ -0.81
MSH3-203ENST00000512531 ZNF318Q5VUA4 2279 aa10□□□□□ -0.81
MSH3-203ENST00000512531 NLRC5Q86WI3 1866 aa10□□□□□ -0.81
MSH3-203ENST00000512531 MBLAC1A4D2B0 266 aaPredicted RBP10□□□□□ -0.81
MSH3-203ENST00000512531 H3BQ06 376 aaPredicted RBP10□□□□□ -0.81
MSH3-203ENST00000512531 XPOTO43592 962 aaKnown RBP10□□□□□ -0.81
MSH3-203ENST00000512531 PROSCO94903 275 aa10□□□□□ -0.81
MSH3-203ENST00000512531 ASS1P00966 412 aaKnown RBP10□□□□□ -0.81
MSH3-203ENST00000512531 CYP1A1P04798 512 aaPredicted RBP10□□□□□ -0.81
MSH3-203ENST00000512531 PAEPP09466 180 aa10□□□□□ -0.81
MSH3-203ENST00000512531 LINC00271P0C7V0 271 aa10□□□□□ -0.81
MSH3-203ENST00000512531 ATF7P17544 494 aaPredicted RBP10□□□□□ -0.81
MSH3-203ENST00000512531 EIF4BP23588 611 aaKnown RBP10□□□□□ -0.81
MSH3-203ENST00000512531 VARSP26640 1264 aaKnown RBP10□□□□□ -0.81
MSH3-203ENST00000512531 ATP5DP30049 168 aa10□□□□□ -0.81
MSH3-203ENST00000512531 LTBRP36941 435 aa10□□□□□ -0.81
MSH3-203ENST00000512531 CARSP49589 748 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms