RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 ANO10Q9NW15 660 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 KIF3AQ9Y496 699 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 CSADQ9Y600 493 aa6.66□□□□□ -1.34
TRAPPC11-209ENST00000512476 PTPRTO14522 1441 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 PASKQ96RG2 1323 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 CEP152O94986 1710 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 SPHKAPQ2M3C7 1700 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 REREQ9P2R6 1566 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 GOLGA6L10A0A0M3HER8 536 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 PRAMEF27A3QJZ7 478 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 NCF1BA6NI72 391 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 NCF1CA8MVU1 366 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 TP73O15350 636 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 ADH1AP07327 375 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 NT5C2P49902 561 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 PEX5P50542 639 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 HNRNPUQ00839 825 aaKnown RBP eCLIP6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 FSTL1Q12841 308 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 STK11Q15831 433 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 SMU1Q2TAY7 513 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 DMRTA1Q5VZB9 504 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 FBXO38Q6PIJ6 1188 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 B3GNT6Q6ZMB0 384 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 METTL23Q86XA0 190 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 DNAJC10Q8IXB1 793 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 SYCP3Q8IZU3 236 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 CARFQ8N187 725 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZNF610Q8N9Z0 462 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 TSPEARQ8WU66 669 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 CYFIP2Q96F07 1278 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 FAM163AQ96GL9 167 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 HSD3B7Q9H2F3 369 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 NKX2-4Q9H2Z4 354 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 POLR3BQ9NW08 1133 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 SPATA7Q9P0W8 599 aa6.65□□□□□ -1.34
TRAPPC11-209ENST00000512476 TRPM2O94759 1503 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 IGSF1Q8N6C5 1336 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 H0YCG3 227 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 TPM1P09493 284 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 PRG2P13727 222 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 NCF1P14598 390 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 AP3M2P53677 418 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 EPHB4P54760 987 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 ST5P78524 1137 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 ATP11AP98196 1134 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 FRG1Q14331 258 aaKnown RBP6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 TMEM214Q6NUQ4 689 aaKnown RBP6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 ATF7IPQ6VMQ6 1270 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 BICDL1Q6ZP65 573 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 HID1Q8IV36 788 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 FRMD1Q8N878 549 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 GLB1L3Q8NCI6 653 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 GANCQ8TET4 914 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 KCNE4Q8WWG9 221 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 FAM167AQ96KS9 214 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 PUS3Q9BZE2 481 aaKnown RBP6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 C19orf44Q9H6X5 657 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 PRDM8Q9NQV8 689 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 SELENONQ9NZV5 590 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 STK39Q9UEW8 545 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 MSRAQ9UJ68 235 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 PCDHA13Q9Y5I0 950 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 CLDN16Q9Y5I7 305 aa6.65□□□□□ -1.35
TRAPPC11-209ENST00000512476 ABCC3O15438 1527 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 EXOC3O60645 756 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 NOL3O60936 208 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 RECQL4O94761 1208 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 HMGCRP04035 888 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 CARD18P57730 90 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ATP8B2P98198 1209 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 PMP22Q01453 160 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ELP6Q0PNE2 266 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 MPP3Q13368 585 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 TUSC3Q13454 348 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 C15orf59Q2T9L4 293 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 C2orf76Q3KRA6 126 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 CFAP221Q4G0U5 840 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 DIEXFQ68CQ4 756 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ADALQ6DHV7 355 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 SGMS1Q86VZ5 419 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 LRRC49Q8IUZ0 686 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 FAM217AQ8IXS0 508 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 PHACTR4Q8IZ21 702 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 DPP10Q8N608 796 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 USHBP1Q8N6Y0 703 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ZNF321PQ8N8H1 164 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 METTL6Q8TCB7 284 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 SH3GL1Q99961 368 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 C19orf43Q9BQ61 176 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 CLSTN2Q9H4D0 955 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 SACM1LQ9NTJ5 587 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 FBXO40Q9UH90 709 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 EXOC6BQ9Y2D4 811 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 RPH3AQ9Y2J0 694 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ARHGEF40Q8TER5 1519 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ENO4A6NNW6 628 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 STX16-NPEPL1H3BU86 382 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 DNM1LO00429 736 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 STX16O14662 325 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms