RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 FBXL16Q8N461 479 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 C2orf15Q8WU43 125 aaKnown RBP9.83□□□□□ -0.84
NUP54-211ENST00000512151 TTC9Q92623 222 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 WBP1Q96G27 269 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 ACOX2Q99424 681 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 NAP1L4Q99733 375 aaKnown RBP9.83□□□□□ -0.84
NUP54-211ENST00000512151 TMEM60Q9H2L4 133 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 TMEM134Q9H6X4 195 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 TUFT1Q9NNX1 390 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 ARHGAP28Q9P2N2 729 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 UBQLN1Q9UMX0 589 aaKnown RBP9.83□□□□□ -0.84
NUP54-211ENST00000512151 AK5Q9Y6K8 562 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 TMEM131Q92545 1883 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 A0A1B0GVT2 93 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 TRIM24O15164 1050 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 NDUFS2O75306 463 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 PRPF40AO75400 957 aaKnown RBP9.82□□□□□ -0.84
NUP54-211ENST00000512151 CER1O95813 267 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 NTRK1P04629 796 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 HOXB2P14652 356 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 PSMA5P28066 241 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 EIF2DP41214 584 aaKnown RBP9.82□□□□□ -0.84
NUP54-211ENST00000512151 IL12RB1P42701 662 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 PEX3P56589 373 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 EVCP57679 992 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 KCNH2Q12809 1159 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 NR5A1Q13285 461 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 TOB2Q14106 344 aaPredicted RBP9.82□□□□□ -0.84
NUP54-211ENST00000512151 NOLC1Q14978 699 aaKnown RBP eCLIP9.82□□□□□ -0.84
NUP54-211ENST00000512151 RTP5Q14D33 572 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 WDR45BQ5MNZ6 344 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 EGFLAMQ63HQ2 1017 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 WSCD1Q658N2 575 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 ERICH1Q86X53 443 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 FAM177A1Q8N128 213 aaPredicted RBP9.82□□□□□ -0.84
NUP54-211ENST00000512151 ZNF513Q8N8E2 541 aaPredicted RBP9.82□□□□□ -0.84
NUP54-211ENST00000512151 C1orf216Q8TAB5 229 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 FOXJ1Q92949 421 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 TNFRSF25Q93038 417 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 TRMT2BQ96GJ1 504 aaKnown RBP9.82□□□□□ -0.84
NUP54-211ENST00000512151 MYRFLQ96LU7 910 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
NUP54-211ENST00000512151 MIR1-1HGQ9H1L0 117 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 CPNE5Q9HCH3 593 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 IL17BQ9UHF5 180 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 PCDHB5Q9Y5E4 795 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 AHCTF1Q8WYP5 2266 aa9.82□□□□□ -0.84
NUP54-211ENST00000512151 CBX4O00257 560 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 KCNK3O14649 394 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 BRINP1O60477 761 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 ZNF217O75362 1048 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 CD2BP2O95400 341 aaKnown RBP9.81□□□□□ -0.84
NUP54-211ENST00000512151 HDCP19113 662 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 CYP2F1P24903 491 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 ANP32AP39687 249 aaKnown RBP9.81□□□□□ -0.84
NUP54-211ENST00000512151 RHDQ02161 417 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 TARDBPQ13148 414 aaKnown RBP eCLIP9.81□□□□□ -0.84
NUP54-211ENST00000512151 KCNB1Q14721 858 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 PKDCCQ504Y2 493 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 C6orf118Q5T5N4 469 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 ARHGAP40Q5TG30 622 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 SPATA1Q5VX52 437 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 C9orf57Q5W0N0 161 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 USP49Q70CQ1 688 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 ETFBKMTQ8IXQ9 262 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 IPO4Q8TEX9 1081 aaKnown RBP9.81□□□□□ -0.84
NUP54-211ENST00000512151 BAP1Q92560 729 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 KIFAP3Q92845 792 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 FGF11Q92914 225 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 TMEM176AQ96HP8 235 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 MRGPRX1Q96LB2 322 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 ANP32EQ9BTT0 268 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 PLEKHA5Q9HAU0 1116 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 PDRG1Q9NUG6 133 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 RAD54BQ9Y620 910 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 CYP46A1Q9Y6A2 500 aa9.81□□□□□ -0.84
NUP54-211ENST00000512151 ANKRD17O75179 2603 aaKnown RBP9.81□□□□□ -0.84
NUP54-211ENST00000512151 TBC1D3BA6NDS4 549 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 MEI4A8MW99 385 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 PIRO00625 290 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 CYB561D2O14569 222 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 SLC16A4O15374 487 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 BCAT2O15382 392 aaPredicted RBP9.8□□□□□ -0.84
NUP54-211ENST00000512151 TOM1L1O75674 476 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 CLTAP09496 248 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 ADH5P11766 374 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 NCAM1P13591 858 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 JUPP14923 745 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 NTSR1P30989 418 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 CSNK1EP49674 416 aaKnown RBP9.8□□□□□ -0.84
NUP54-211ENST00000512151 NEK4P51957 841 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 MCL1Q07820 350 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 MAPK7Q13164 816 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 ENOX2Q16206 610 aaKnown RBP9.8□□□□□ -0.84
NUP54-211ENST00000512151 KIF19Q2TAC6 998 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 PREPLQ4J6C6 727 aaPredicted RBP9.8□□□□□ -0.84
NUP54-211ENST00000512151 LY6G5CQ5SRR4 150 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 DCAF12L1Q5VU92 463 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 PRICKLE2Q7Z3G6 844 aa9.8□□□□□ -0.84
NUP54-211ENST00000512151 NAT16Q8N8M0 369 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms