RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CLSTN2Q9H4D0 955 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 C8orf33Q9H7E9 229 aaPredicted RBP12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 CISHQ9NSE2 258 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 THG1LQ9NWX6 298 aaKnown RBP12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 MRPS17Q9Y2R5 130 aaKnown RBP12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 TICRRQ7Z2Z1 1910 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 FAM92AA1XBS5 289 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 OLFM2O95897 454 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 OAS1P00973 400 aaKnown RBP12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 CKMP06732 381 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 TCF3P15923 654 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 ADORA2BP29275 332 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 SLC5A3P53794 718 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 MARSP56192 900 aaKnown RBP12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 MAP3K7CLP57077 242 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 ZXDBP98169 803 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 IFRD2Q12894 506 aaPredicted RBP12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 USP4Q13107 963 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 CCDC40Q4G0X9 1142 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 TTC8Q8TAM2 541 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 FAM3CQ92520 227 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 ATOH1Q92858 354 aaPredicted RBP12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 SLITRK1Q96PX8 696 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 SRRTQ9BXP5 876 aaKnown RBP12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 RNF38Q9H0F5 515 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 FAM124BQ9H5Z6 455 aaPredicted RBP12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 HPS4Q9NQG7 708 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 COMMD8Q9NX08 183 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 NDRG2Q9UN36 371 aaKnown RBP12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 ARHGAP26Q9UNA1 814 aa12.31□□□□□ -0.44
SH3RF1-205ENST00000511421 OTOL1A6NHN0 477 aaPredicted RBP12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 HHLA1C9JL84 531 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 SPECC1L-ADORA2AF8WAN1 911 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 HOXD11P31277 338 aaPredicted RBP12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 CTHP32929 405 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 RPS9P46781 194 aaKnown RBP12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 KPNA1P52294 538 aaPredicted RBP12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 RAD23BP54727 409 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 SLC7A9P82251 487 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 CUL2Q13617 745 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 MTF1Q14872 753 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 ZNF394Q53GI3 561 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 TRIM68Q6AZZ1 485 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 TXNDC11Q6PKC3 985 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 CLEC20AQ6ZU45 233 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 C1orf210Q8IVY1 113 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 TRIM59Q8IWR1 403 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 TTC39CQ8N584 583 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 SLC4A11Q8NBS3 891 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 SH3RF2Q8TEC5 729 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 OVCA2Q8WZ82 227 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 MSANTD3Q96H12 275 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 LMBRD1Q9NUN5 540 aa12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 KIF26AQ9ULI4 1882 aaPredicted RBP12.3□□□□□ -0.44
SH3RF1-205ENST00000511421 NCAM2O15394 837 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 GNA14O95837 355 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 ZDHHC11BP0C7U3 371 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 FAM200BP0CF97 657 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 CHRNB1P11230 501 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 TRIM21P19474 475 aaKnown RBP12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 MAGEA9P43362 315 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 PDE6CP51160 858 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 ITPRIPL2Q3MIP1 535 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 PPP1R26Q5T8A7 1209 aaPredicted RBP12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 SNX30Q5VWJ9 437 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 C1orf228Q6PIY5 440 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 GPRIN1Q7Z2K8 1008 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 RALGPS2Q86X27 583 aaPredicted RBP12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 MAML2Q8IZL2 1156 aaPredicted RBP12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 UBR7Q8N806 425 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 LMO3Q8TAP4 145 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 FBXO32Q969P5 355 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 CHFRQ96EP1 664 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 TMEM176AQ96HP8 235 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 HEXIM2Q96MH2 286 aaKnown RBP12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 EBF3Q9H4W6 596 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 CHORDC1Q9UHD1 332 aaPredicted RBP12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 RWDD2AQ9UIY3 292 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 MIA3Q5JRA6 1907 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 P4HA2O15460 535 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 ABL1P00519 1130 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 ARSAP15289 507 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 PGFP49763 221 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 LRMPQ12912 555 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 RUNX3Q13761 415 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 PDGFRLQ15198 375 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 CC2D1AQ6P1N0 951 aaPredicted RBP12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 PDZD8Q8NEN9 1154 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 OSCP1Q8WVF1 389 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 DUSP16Q9BY84 665 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 CHRDQ9H2X0 955 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 LMAN1LQ9HAT1 526 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 PNPLA8Q9NP80 782 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 GMIPQ9P107 970 aa12.29□□□□□ -0.44
SH3RF1-205ENST00000511421 PROB1E7EW31 1015 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 LEFTY2O00292 366 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 NBL1P41271 181 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 MRE11P49959 708 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms