RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 IRX4P78413 519 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 AMPD2Q01433 879 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 CRY1Q16526 586 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 ANO7Q6IWH7 933 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 PSAPL1Q6NUJ1 521 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 SHC4Q6S5L8 630 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 WDR49Q8IV35 697 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 ALLCQ8N6M5 410 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 IL17RCQ8NAC3 791 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 SCFD1Q8WVM8 642 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 CHAMP1Q96JM3 812 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 C8orf48Q96LL4 319 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 KCNK16Q96T55 309 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 MMS19Q96T76 1030 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 EDEM2Q9BV94 578 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 AGPAT3Q9NRZ7 376 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 MBD1Q9UIS9 605 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-202ENST00000509637 ANGPTL2Q9UKU9 493 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 MMP17Q9ULZ9 603 aa16.98■□□□□ 0.31
RAB40C-202ENST00000509637 TNRC6BQ9UPQ9 1833 aaKnown RBP16.98■□□□□ 0.31
RAB40C-202ENST00000509637 TRIM24O15164 1050 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 TACC1O75410 805 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 GNL1P36915 607 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-202ENST00000509637 CASP4P49662 377 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 MYL6P60660 151 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 NOP14P78316 857 aaKnown RBP16.97■□□□□ 0.31
RAB40C-202ENST00000509637 CYP24A1Q07973 514 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 MYO1EQ12965 1108 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 C4orf50Q6ZRC1 276 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 CCDC65Q8IXS2 484 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 TSTD1Q8NFU3 115 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 DDX1Q92499 740 aaKnown RBP16.97■□□□□ 0.31
RAB40C-202ENST00000509637 FNBP1Q96RU3 617 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 TMEM121BQ9BXQ6 578 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-202ENST00000509637 TMEM74BQ9NUR3 256 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 TRPM5Q9NZQ8 1165 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 CFAP97Q9P2B7 532 aa16.97■□□□□ 0.31
RAB40C-202ENST00000509637 A0A0A0MRY4 1105 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 NFATC1O95644 943 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 TNNC2P02585 160 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 DLATP10515 647 aaKnown RBP16.96■□□□□ 0.31
RAB40C-202ENST00000509637 GBP1P32455 592 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 TIE1P35590 1138 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 PSMD6Q15008 389 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 SNRNP35Q16560 246 aaKnown RBP16.96■□□□□ 0.31
RAB40C-202ENST00000509637 HS2ST1Q7LGA3 356 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 NELFCDQ8IXH7 590 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 FSIP1Q8NA03 581 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 TXNDC5Q8NBS9 432 aaKnown RBP16.96■□□□□ 0.31
RAB40C-202ENST00000509637 OR6B3Q8NGW1 331 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 SCAMP5Q8TAC9 235 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 ACDQ96AP0 544 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 CCDC127Q96BQ5 260 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 P2RY11Q96G91 374 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 CNOT6LQ96LI5 555 aaKnown RBP16.96■□□□□ 0.31
RAB40C-202ENST00000509637 CGRRF1Q99675 332 aa16.96■□□□□ 0.31
RAB40C-202ENST00000509637 CHORDC1Q9UHD1 332 aaPredicted RBP16.96■□□□□ 0.31
RAB40C-202ENST00000509637 PCNX2A6NKB5 2137 aa16.96■□□□□ 0.3
RAB40C-202ENST00000509637 PI4KAP42356 2102 aa16.96■□□□□ 0.3
RAB40C-202ENST00000509637 C1QTNF9BB2RNN3 333 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 TNFRSF10BO14763 440 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 KIAA0391O15091 583 aaKnown RBP16.95■□□□□ 0.3
RAB40C-202ENST00000509637 COCHO43405 550 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 BEST1O76090 585 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 RHOBTB1O94844 696 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 KLF8O95600 359 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-202ENST00000509637 ABL1P00519 1130 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 C1QTNF9P0C862 333 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 TXLNAP40222 546 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 CYP2J2P51589 502 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 NR1H3Q13133 447 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 ELF2Q15723 593 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 WDR72Q3MJ13 1102 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 CNNM4Q6P4Q7 775 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 MIB1Q86YT6 1006 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 ZMIZ2Q8NF64 920 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 DHX58Q96C10 678 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 BLZF1Q9H2G9 400 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 TNMDQ9H2S6 317 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 SMYD3Q9H7B4 428 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 IL37Q9NZH6 218 aa16.95■□□□□ 0.3
RAB40C-202ENST00000509637 EIF3DO15371 548 aaKnown RBP eCLIP16.94■□□□□ 0.3
RAB40C-202ENST00000509637 GREM1O60565 184 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 VNN1O95497 513 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 PFKLP17858 780 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 PDCP20941 246 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 P2RY2P41231 377 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 PTGER3P43115 390 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 IFRD2Q12894 506 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-202ENST00000509637 SURF1Q15526 300 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 MAP7D1Q3KQU3 841 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 FAM26FQ5R3K3 315 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 LY6G5CQ5SRR4 150 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 ETFBKMTQ8IXQ9 262 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 CEP295NLQ96MC4 621 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 C7orf25Q9BPX7 421 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 SNX25Q9H3E2 840 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 CCSER2Q9H7U1 834 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 FSCN3Q9NQT6 498 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 NXF1Q9UBU9 619 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms