RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 PRICKLE1Q96MT3 831 aaPredicted RBP2.4□□□□□ -2.03
CAST-226ENST00000509529 MEIS3Q99687 375 aa2.4□□□□□ -2.03
CAST-226ENST00000509529 TRIM55Q9BYV6 548 aa2.4□□□□□ -2.03
CAST-226ENST00000509529 C1orf21Q9H246 121 aa2.4□□□□□ -2.03
CAST-226ENST00000509529 TCF7L2Q9NQB0 619 aa2.4□□□□□ -2.03
CAST-226ENST00000509529 REV1Q9UBZ9 1251 aa2.4□□□□□ -2.03
CAST-226ENST00000509529 EXOC7Q9UPT5 735 aa2.4□□□□□ -2.03
CAST-226ENST00000509529 CARD8Q9Y2G2 431 aa2.4□□□□□ -2.03
CAST-226ENST00000509529 MN1Q10571 1320 aaPredicted RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 ADGRF5Q8IZF2 1346 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 PASKQ96RG2 1323 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 ZBTB7CA1YPR0 619 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TMEM114B3SHH9 223 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 NVLO15381 856 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 PHF2O75151 1096 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TACC1O75410 805 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 SUN1O94901 812 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 KRT6AP02538 564 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 AFPP02771 609 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 KRT6BP04259 564 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 ATP1A1P05023 1023 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 LYNP07948 512 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 FDPSP14324 419 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 VAV1P15498 845 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 ALOX15P16050 662 aaPredicted RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 HSPA6P17066 643 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TBXAS1P24557 533 aaPredicted RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 POLD1P28340 1107 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 LONP1P36776 959 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 MAPK8P45983 427 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TUBP50607 506 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TNNC1P63316 161 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 PTH1RQ03431 593 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 BTKQ06187 659 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 SLC34A1Q06495 639 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 MOGSQ13724 837 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TUBA3CQ13748 450 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 DPYSQ14117 519 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 R3HDM1Q15032 1099 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 LONRF3Q496Y0 759 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 CFAP221Q4G0U5 840 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 NAALADL2Q58DX5 795 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 HSP90AA5PQ58FG0 334 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 SLC45A4Q5BKX6 768 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 ZNF658Q5TYW1 1059 aaPredicted RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 PPP4R4Q6NUP7 873 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 HIBCHQ6NVY1 386 aaPredicted RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 TMEM53Q6P2H8 277 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TMEM154Q6P9G4 183 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 SHC4Q6S5L8 630 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 GADL1Q6ZQY3 521 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 MRPL10Q7Z7H8 261 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 C11orf74Q86VG3 221 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 AHI1Q8N157 1196 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 VGLL2Q8N8G2 317 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 ATP6V0D2Q8N8Y2 350 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 KBTBD3Q8NAB2 608 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 CKAP2Q8WWK9 683 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 RASSF5Q8WWW0 418 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 SREK1Q8WXA9 508 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 ZNF75CPQ92670 426 aaPredicted RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 SKA1Q96BD8 255 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 HIC2Q96JB3 615 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 CDK5RAP1Q96SZ6 601 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 TCHPQ9BT92 498 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TRAIPQ9BWF2 469 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 MRPS26Q9BYN8 205 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 CRNKL1Q9BZJ0 848 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 NACAP1Q9BZK3 213 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 FOXP1Q9H334 677 aaPredicted RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 SMARCAD1Q9H4L7 1026 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 ECT2Q9H8V3 914 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 PLGRKTQ9HBL7 147 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 MOV10Q9HCE1 1003 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 AP5S1Q9NUS5 200 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 EURLQ9NYK6 297 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TBC1D7Q9P0N9 293 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 UVRAGQ9P2Y5 699 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 GNPTGQ9UJJ9 305 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 FBXL5Q9UKA1 691 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 APPL1Q9UKG1 709 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 AGAP1Q9UPQ3 857 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 PCDHGB3Q9Y5G1 929 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 SRPRBQ9Y5M8 271 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 PCDH11XQ9BZA7 1347 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 MYH7P12883 1935 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 VPS37CA5D8V6 355 aaPredicted RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 IQCA1LA6NCM1 817 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 CCDC169A6NNP5 214 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 NDC80O14777 642 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 ACOX3O15254 700 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 ZC3H11AO75152 810 aaKnown RBP eCLIP2.39□□□□□ -2.03
CAST-226ENST00000509529 DCTN3O75935 186 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 STK10O94804 968 aaKnown RBP2.39□□□□□ -2.03
CAST-226ENST00000509529 ZWINTO95229 277 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 TGDSO95455 350 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 GGPS1O95749 300 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 GAS8O95995 478 aa2.39□□□□□ -2.03
CAST-226ENST00000509529 NTRK1P04629 796 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms