RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 ZNF197O14709 1029 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 FGF19O95750 216 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 LCP1P13796 627 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 CHRNB2P17787 502 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 HNRNPH3P31942 346 aaKnown RBP15.64■□□□□ 0.09
RNF4-213ENST00000509388 MTHFRP42898 656 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 TKTL1P51854 596 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 FMO1Q01740 532 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 PABPC1LQ4VXU2 614 aaKnown RBP15.64■□□□□ 0.09
RNF4-213ENST00000509388 E4F1Q66K89 784 aaPredicted RBP15.64■□□□□ 0.09
RNF4-213ENST00000509388 PMF1Q6P1K2 205 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 C1orf131Q8NDD1 294 aaKnown RBP15.64■□□□□ 0.09
RNF4-213ENST00000509388 STKLD1Q8NE28 680 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 KCTD13Q8WZ19 329 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 FBXO32Q969P5 355 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 MSLNLQ96KJ4 702 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 NECTIN4Q96NY8 510 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 SLITRK1Q96PX8 696 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 MIS12Q9H081 205 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 S1PR5Q9H228 398 aa15.64■□□□□ 0.09
RNF4-213ENST00000509388 DNMT3BQ9UBC3 853 aaKnown RBP15.64■□□□□ 0.09
RNF4-213ENST00000509388 TNFRSF10BO14763 440 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 RHOP08100 348 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 CDC25CP30307 473 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 NSFP46459 744 aaKnown RBP15.63■□□□□ 0.09
RNF4-213ENST00000509388 GSDMDP57764 484 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 PDCLQ13371 301 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 ARID5BQ14865 1188 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 NAA35Q5VZE5 725 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 PPP1R2P3Q6NXS1 205 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 ZNF571Q7Z3V5 609 aaPredicted RBP15.63■□□□□ 0.09
RNF4-213ENST00000509388 ERICH1Q86X53 443 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 HS6ST3Q8IZP7 471 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 TC2NQ8N9U0 490 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 SCAMP5Q8TAC9 235 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 CPA5Q8WXQ8 436 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 TRMT2BQ96GJ1 504 aaKnown RBP15.63■□□□□ 0.09
RNF4-213ENST00000509388 PPP1R13BQ96KQ4 1090 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 CCDC42Q96M95 316 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 HCFC1R1Q9NWW0 138 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 TRPM5Q9NZQ8 1165 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 FAM50BQ9Y247 325 aa15.63■□□□□ 0.09
RNF4-213ENST00000509388 MRPS23Q9Y3D9 190 aaKnown RBP15.63■□□□□ 0.09
RNF4-213ENST00000509388 HHLA1C9JL84 531 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 PIK3R2O00459 728 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 AKR1B10O60218 316 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 ZBED1O96006 694 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 ABL1P00519 1130 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 HMGA1P17096 107 aaKnown RBP15.62■□□□□ 0.09
RNF4-213ENST00000509388 GABRR2P28476 465 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 PPP3CCP48454 512 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 KIF11P52732 1056 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 USP46P62068 366 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 NTHL1P78549 312 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 ADIGQ0VDE8 80 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 TAF10Q12962 218 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 SMAD4Q13485 552 aaKnown RBP15.62■□□□□ 0.09
RNF4-213ENST00000509388 CLEC16AQ2KHT3 1053 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 PUS10Q3MIT2 529 aaKnown RBP15.62■□□□□ 0.09
RNF4-213ENST00000509388 HGSNATQ68CP4 663 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 GPRIN1Q7Z2K8 1008 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 WDTC1Q8N5D0 677 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 SMRP1Q8NCR6 262 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 PDZD8Q8NEN9 1154 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 GOLGA1Q92805 767 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 MYRFLQ96LU7 910 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 PANX2Q96RD6 677 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 SLC4A5Q9BY07 1137 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 ATXN3LQ9H3M9 355 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 WDR6Q9NNW5 1121 aaKnown RBP15.62■□□□□ 0.09
RNF4-213ENST00000509388 CYLDQ9NQC7 956 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 ADAMTS1Q9UHI8 967 aa15.62■□□□□ 0.09
RNF4-213ENST00000509388 TMCO5BA8MYB1 307 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 SART1O43290 800 aaKnown RBP15.61■□□□□ 0.09
RNF4-213ENST00000509388 FBXO21O94952 628 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 PAPLNO95428 1278 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 CYP1A1P04798 512 aaPredicted RBP15.61■□□□□ 0.09
RNF4-213ENST00000509388 PLEKP08567 350 aaPredicted RBP15.61■□□□□ 0.09
RNF4-213ENST00000509388 USP17L7P0C7H9 530 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 FSHRP23945 695 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 CDH5P33151 784 aaPredicted RBP15.61■□□□□ 0.09
RNF4-213ENST00000509388 EIF4A3P38919 411 aaKnown RBP15.61■□□□□ 0.09
RNF4-213ENST00000509388 NOMO3P69849 1222 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 AAK1Q2M2I8 961 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 LEXMQ3ZCV2 418 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 ARHGAP15Q53QZ3 475 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 RAB41Q5JT25 222 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 WDR59Q6PJI9 974 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 TMEM110Q86TL2 294 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 ARHGAP18Q8N392 663 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 MRPS31Q92665 395 aaKnown RBP15.61■□□□□ 0.09
RNF4-213ENST00000509388 C18orf8Q96DM3 657 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 PCDHB18PQ96TA0 734 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 TTLL2Q9BWV7 592 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 ULBP1Q9BZM6 244 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 CNGB3Q9NQW8 809 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 TLR8Q9NR97 1041 aaKnown RBP15.61■□□□□ 0.09
RNF4-213ENST00000509388 ARHGAP20Q9P2F6 1191 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 CHORDC1Q9UHD1 332 aaPredicted RBP15.61■□□□□ 0.09
RNF4-213ENST00000509388 SCML2Q9UQR0 700 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms