RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 MARCH11A6NNE9 402 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 PIP5K1BO14986 540 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 CD3EAPO15446 510 aaKnown RBP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 PEX11BO96011 259 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 ITGA5P08648 1049 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 DHRS4L1P0CG22 281 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 LAG3P18627 525 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 DDX6P26196 483 aaKnown RBP eCLIP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 EPHA3P29320 983 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 ATICP31939 592 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 MCM7P33993 719 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 PDE6CP51160 858 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 VAV2P52735 878 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 ITGA8P53708 1063 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 BCAT1P54687 386 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 ARL4CP56559 192 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 POU5F1BQ06416 359 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 PRKG1Q13976 671 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZIK1Q3SY52 487 aaPredicted RBP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 CD300EQ496F6 205 aaPredicted RBP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 RBM20Q5T481 1227 aaKnown RBP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 ARHGAP40Q5TG30 622 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 MANEALQ5VSG8 457 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 TANGO2Q6ICL3 276 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 USP49Q70CQ1 688 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 CCDC28AQ8IWP9 274 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 DNAJC10Q8IXB1 793 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 ABHD5Q8WTS1 349 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 RSC1A1Q92681 617 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 EXTL1Q92935 676 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 FUBP1Q96AE4 644 aaKnown RBP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 TBC1D20Q96BZ9 403 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 FAM136AQ96C01 138 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 C18orf8Q96DM3 657 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 MYEOVQ96EZ4 313 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 PRPF18Q99633 342 aaKnown RBP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 NAP1L4Q99733 375 aaKnown RBP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 MAGEH1Q9H213 219 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 SLC25A32Q9H2D1 315 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 CXorf36Q9H7Y0 433 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 DNAJB11Q9UBS4 358 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 HERC5Q9UII4 1024 aaKnown RBP4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 GTF2A1LQ9UNN4 478 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 HPSEQ9Y251 543 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 TBC1D30Q9Y2I9 924 aa4.4□□□□□ -1.71
COL4A3BP-205ENST00000508692 A0A087X1B8 175 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 CCDC78A2IDD5 438 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 OR2W5A6NFC9 320 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 hCG_1984214I3L0E3 225 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 ACKR2O00590 384 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 IRAK2O43187 625 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 SNX2O60749 519 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 SRGAP2O75044 1071 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 NCR1O76036 304 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 CDKL5O76039 1030 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 NDUFA10O95299 355 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 NTSR2O95665 410 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 VIPP01282 170 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 ITGA2BP08514 1039 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 SRGNP10124 158 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 NPPBP16860 134 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 GATMP50440 423 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 MC2RQ01718 297 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 RESTQ13127 1097 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 ATP1A4Q13733 1029 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 BEAN1Q3B7T3 259 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 LSM12Q3MHD2 195 aaKnown RBP4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 RGS7BPQ6MZT1 257 aaPredicted RBP4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 RINLQ6ZS11 566 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 KCTD20Q7Z5Y7 419 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 TTC30AQ86WT1 665 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 RASGRP3Q8IV61 690 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 GALNT15Q8N3T1 639 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 FAM109AQ8N4B1 249 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZNF276Q8N554 614 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 IPO4Q8TEX9 1081 aaKnown RBP4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 NEU4Q8WWR8 484 aaPredicted RBP4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 TMEM125Q96AQ2 219 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 GCC1Q96CN9 775 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 INO80BQ9C086 356 aaPredicted RBP4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 AMBRA1Q9C0C7 1298 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 IGSF9Q9P2J2 1179 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 MRPS17Q9Y2R5 130 aaKnown RBP4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 DTNAQ9Y4J8 743 aa4.39□□□□□ -1.71
COL4A3BP-205ENST00000508692 TMEM200CA6NKL6 621 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 AQP12BA6NM10 295 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 PLSCR1O15162 318 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 MST1P26927 711 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 ALDH18A1P54886 795 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 INHBCP55103 352 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 NXPH1P58417 271 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 ITIH3Q06033 890 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 GEN1Q17RS7 908 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 ALFQ53S48 1182 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 TMTC4Q5T4D3 741 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 TEDDM1Q5T9Z0 273 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 ATPAF1Q5TC12 328 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms