RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 CXorf36Q9H7Y0 433 aa3.91□□□□□ -1.78
GYPB-209ENST00000508618 TMA7Q9Y2S6 64 aaKnown RBP3.91□□□□□ -1.78
GYPB-209ENST00000508618 HS3ST3B1Q9Y662 390 aa3.91□□□□□ -1.78
GYPB-209ENST00000508618 GABRDO14764 452 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 FTLP02792 175 aaPredicted RBP3.9□□□□□ -1.79
GYPB-209ENST00000508618 GRPP07492 148 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 CTSAP10619 480 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 SUMO2P61956 95 aaKnown RBP3.9□□□□□ -1.79
GYPB-209ENST00000508618 DEPDC1Q5TB30 811 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 SDE2Q6IQ49 451 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 CAND1Q86VP6 1230 aaKnown RBP3.9□□□□□ -1.79
GYPB-209ENST00000508618 MIER2Q8N344 545 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 PRR18Q8N4B5 295 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 CCDC17Q96LX7 622 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 ZBTB40Q9NUA8 1239 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 TRHDEQ9UKU6 1024 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 MAFFQ9ULX9 164 aa3.9□□□□□ -1.79
GYPB-209ENST00000508618 FOXN3O00409 490 aaPredicted RBP3.89□□□□□ -1.79
GYPB-209ENST00000508618 ZRANB2O95218 330 aaKnown RBP eCLIP3.89□□□□□ -1.79
GYPB-209ENST00000508618 TGFB3P10600 412 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 XRCC6P12956 609 aaKnown RBP eCLIP3.89□□□□□ -1.79
GYPB-209ENST00000508618 MAP2K6P52564 334 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 PSG6Q00889 435 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 PCBP2Q15366 365 aaKnown RBP eCLIP3.89□□□□□ -1.79
GYPB-209ENST00000508618 KRTAP27-1Q3LI81 207 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 TMTC4Q5T4D3 741 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 DENND2CQ68D51 928 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 USP43Q70EL4 1123 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 ZNF548Q8NEK5 533 aaPredicted RBP3.89□□□□□ -1.79
GYPB-209ENST00000508618 IGFBPL1Q8WX77 278 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 MESP1Q9BRJ9 268 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 TMEM184CQ9NVA4 438 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 PNPOQ9NVS9 261 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 SELENONQ9NZV5 590 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 ICKQ9UPZ9 632 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 MED16Q9Y2X0 877 aa3.89□□□□□ -1.79
GYPB-209ENST00000508618 C4orf47A7E2U8 309 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 AP4M1O00189 453 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 APEHP13798 732 aaKnown RBP3.88□□□□□ -1.79
GYPB-209ENST00000508618 GKP32189 559 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 DGKEP52429 567 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 SOX8P57073 446 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 NKX6-1P78426 367 aaPredicted RBP3.88□□□□□ -1.79
GYPB-209ENST00000508618 COLCA1Q6ZS62 124 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 PNMA8AQ86V59 439 aaPredicted RBP3.88□□□□□ -1.79
GYPB-209ENST00000508618 GAS2L3Q86XJ1 694 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 DDX42Q86XP3 938 aaKnown RBP eCLIP3.88□□□□□ -1.79
GYPB-209ENST00000508618 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.88□□□□□ -1.79
GYPB-209ENST00000508618 CAMK1GQ96NX5 476 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 XPR1Q9UBH6 696 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 SNX14Q9Y5W7 946 aa3.88□□□□□ -1.79
GYPB-209ENST00000508618 LACTBL1A8MY62 500 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 hCG_1984214I3L0E3 225 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 CYP19A1P11511 503 aaPredicted RBP3.87□□□□□ -1.79
GYPB-209ENST00000508618 KRT10P13645 584 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 KCNA3P22001 575 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 ADORA2AP29274 412 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 CDKN2AP42771 156 aaKnown RBP3.87□□□□□ -1.79
GYPB-209ENST00000508618 HSF1Q00613 529 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 RHDQ02161 417 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 PLS1Q14651 629 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 SEC23BQ15437 767 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 MGAT5BQ3V5L5 792 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 ZNF628Q5EBL2 1059 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 ZNF549Q6P9A3 640 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 GSG1LQ6UXU4 331 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 DPY19L3Q6ZPD9 716 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 PTCHD4Q6ZW05 846 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 USP45Q70EL2 814 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 RAB11FIP4Q86YS3 637 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 MMP21Q8N119 569 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 ZBTB8BQ8NAP8 495 aaPredicted RBP3.87□□□□□ -1.79
GYPB-209ENST00000508618 SLCO5A1Q9H2Y9 848 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 SNX15Q9NRS6 342 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 TXLNGQ9NUQ3 528 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 MRPS17Q9Y2R5 130 aaKnown RBP3.87□□□□□ -1.79
GYPB-209ENST00000508618 PCDHA1Q9Y5I3 950 aa3.87□□□□□ -1.79
GYPB-209ENST00000508618 PMPCBO75439 489 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 CLSTN1O94985 981 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 THP07101 528 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 HDCP19113 662 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 TNFRSF1BP20333 461 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 PDCP20941 246 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 LMAN2Q12907 356 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 MTMR1Q13613 665 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 CERCAMQ5T4B2 595 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 TMEM65Q6PI78 240 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 DCP1BQ8IZD4 617 aaKnown RBP3.86□□□□□ -1.79
GYPB-209ENST00000508618 PCSK9Q8NBP7 692 aaKnown RBP3.86□□□□□ -1.79
GYPB-209ENST00000508618 SLC35A4Q96G79 324 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 TMEM8AQ9HCN3 771 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 ATP8A1Q9Y2Q0 1164 aa3.86□□□□□ -1.79
GYPB-209ENST00000508618 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.86□□□□□ -1.79
GYPB-209ENST00000508618 PSMD9O00233 223 aa3.85□□□□□ -1.79
GYPB-209ENST00000508618 FGF2P09038 288 aa3.85□□□□□ -1.79
GYPB-209ENST00000508618 ZXDBP98169 803 aa3.85□□□□□ -1.79
GYPB-209ENST00000508618 MTX1Q13505 466 aa3.85□□□□□ -1.79
GYPB-209ENST00000508618 ODF1Q14990 250 aa3.85□□□□□ -1.79
GYPB-209ENST00000508618 ZIK1Q3SY52 487 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms