RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PCYOX1Q9UHG3 505 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 CARD8Q9Y2G2 431 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 SNTNA6NMZ2 147 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 LDLRP01130 860 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 ACAT1P24752 427 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 FOLH1Q04609 750 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 MTMR1Q13613 665 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 COG2Q14746 738 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 SNRNP35Q16560 246 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 RIPOR1Q6ZS17 1223 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 RRM2BQ7LG56 351 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 SIX5Q8N196 739 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 ZCCHC9Q8N567 271 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 OR6P1Q8NGX9 317 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 ATG4AQ8WYN0 398 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 SPATA17Q96L03 361 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 CHID1Q9BWS9 393 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIM54Q9BYV2 358 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 IMPAD1Q9NX62 359 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM53CQ9NYF3 392 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 CCNL1Q9UK58 526 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 CROTQ9UKG9 612 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 BTBD3Q9Y2F9 522 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 QRICH2Q9H0J4 1663 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 E9PBE3 544 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 PROSCO94903 275 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 LYNP07948 512 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 CCNA2P20248 432 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 BROXQ5VW32 411 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 KYAT3Q6YP21 454 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 ADGRF4Q8IZF3 695 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 MARCH10Q8NA82 808 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 PDPRQ8NCN5 879 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM13CQ8NE31 585 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 EGFL8Q99944 293 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM118BQ9BPY3 351 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIM8Q9BZR9 551 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 IL1RL2Q9HB29 575 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 MOV10Q9HCE1 1003 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 USE1Q9NZ43 259 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 PCDHA3Q9Y5H8 950 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 ZC3H11AO75152 810 aaKnown RBP eCLIP7.56□□□□□ -1.23e-19■□□□□ 8.5
UBE2D3-224ENST00000508474 TRMUO75648 421 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 MPOP05164 745 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 PDGFRAP16234 1089 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 RPA1P27694 616 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 PSMB9P28065 219 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 ST3GAL1Q11201 340 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 NAB1Q13506 487 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 PKN2Q16513 984 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 KCNT1Q5JUK3 1230 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC27A3Q5K4L6 730 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 AGAP9Q5VTM2 703 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 DCAF15Q66K64 600 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 CCDC149Q6ZUS6 474 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 FBXW8Q8N3Y1 598 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 PLA2G12BQ9BX93 195 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 COPS7BQ9H9Q2 264 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 CLK4Q9HAZ1 481 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 SELENONQ9NZV5 590 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 ZNF180Q9UJW8 692 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 AKT3Q9Y243 479 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 SDR42E2A6NKP2 422 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 TSC22D2O75157 780 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC4A1P02730 911 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 TFRCP02786 760 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 ILF2Q12905 390 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIP4Q15650 581 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 MAPK11Q15759 364 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 QPCTQ16769 361 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 BOLA3Q53S33 107 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 AKAP14Q86UN6 197 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 EXOC3L1Q86VI1 746 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 ENKURQ8TC29 256 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 SH3RF3Q8TEJ3 882 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 PHF21AQ96BD5 680 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 SKA1Q96BD8 255 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 SRPK1Q96SB4 655 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 MRPL4Q9BYD3 311 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 OSGEPQ9NPF4 335 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 COMMD8Q9NX08 183 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 GIN1Q9NXP7 522 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 PREX2Q70Z35 1606 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 CENPXA8MT69 81 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 PROCP04070 461 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 S100A9P06702 114 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 ALOX12P18054 663 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 GTF2H1P32780 548 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 SCNN1DP51172 638 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 GALK1P51570 392 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 MYBPC2Q14324 1141 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM98BQ52LJ0 330 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 ATAD3BQ5T9A4 648 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 NAPEPLDQ6IQ20 393 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 ABRAXAS1Q6UWZ7 409 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 LINC00523Q86TU6 105 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 CASS4Q9NQ75 786 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 C8orf4Q9NR00 106 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 LRRC4BQ9NT99 713 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms