RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 SLC35A4Q96G79 324 aa4.38□□□□□ -1.71
CLOCK-207ENST00000508049 HIPK2Q9H2X6 1198 aa4.38□□□□□ -1.71
CLOCK-207ENST00000508049 USP35Q9P2H5 1018 aa4.38□□□□□ -1.71
CLOCK-207ENST00000508049 HEY2Q9UBP5 337 aa4.38□□□□□ -1.71
CLOCK-207ENST00000508049 ZNF112Q9UJU3 913 aa4.38□□□□□ -1.71
CLOCK-207ENST00000508049 SNX14Q9Y5W7 946 aa4.38□□□□□ -1.71
CLOCK-207ENST00000508049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.38□□□□□ -1.71
CLOCK-207ENST00000508049 FER1L4A9Z1Z3 1794 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 MYO1CO00159 1063 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 MT-CO3P00414 261 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 PSG1P11464 419 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 CYP2C9P11712 490 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 CDK11BP21127 795 aaKnown RBP4.37□□□□□ -1.71
CLOCK-207ENST00000508049 ME1P48163 572 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 DGKEP52429 567 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 UCP3P55916 312 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 ID2Q02363 134 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 PGS1Q32NB8 556 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 AWAT1Q58HT5 328 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 CELF5Q8N6W0 485 aaKnown RBP4.37□□□□□ -1.71
CLOCK-207ENST00000508049 PNISRQ8TF01 805 aaKnown RBP4.37□□□□□ -1.71
CLOCK-207ENST00000508049 VPS33BQ9H267 617 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 SPC25Q9HBM1 224 aa4.37□□□□□ -1.71
CLOCK-207ENST00000508049 PSMD9O00233 223 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 TLR2O60603 784 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 POU2F2P09086 479 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 PHKG2P15735 406 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 RECQLP46063 649 aaPredicted RBP4.36□□□□□ -1.71
CLOCK-207ENST00000508049 COPB1P53618 953 aaKnown RBP4.36□□□□□ -1.71
CLOCK-207ENST00000508049 PRKAG1P54619 331 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 SUMO2P61956 95 aaKnown RBP4.36□□□□□ -1.71
CLOCK-207ENST00000508049 NPY5RQ15761 445 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 ZIK1Q3SY52 487 aaPredicted RBP4.36□□□□□ -1.71
CLOCK-207ENST00000508049 MGAT5BQ3V5L5 792 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 C4orf46Q504U0 113 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 TMEM65Q6PI78 240 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 CATIPQ7Z7H3 387 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 ZNF548Q8NEK5 533 aaPredicted RBP4.36□□□□□ -1.71
CLOCK-207ENST00000508049 TMEM171Q8WVE6 324 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 MESP1Q9BRJ9 268 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 LPAR3Q9UBY5 353 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 PROCRQ9UNN8 238 aa4.36□□□□□ -1.71
CLOCK-207ENST00000508049 B4DGG1 531 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 SMAD6O43541 496 aaKnown RBP4.35□□□□□ -1.71
CLOCK-207ENST00000508049 XRCC6P12956 609 aaKnown RBP eCLIP4.35□□□□□ -1.71
CLOCK-207ENST00000508049 KCNA3P22001 575 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 GKP32189 559 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 SLC11A2P49281 568 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 CDKN1CP49918 316 aaPredicted RBP4.35□□□□□ -1.71
CLOCK-207ENST00000508049 SRSF1Q07955 248 aaKnown RBP eCLIP4.35□□□□□ -1.71
CLOCK-207ENST00000508049 MLC1Q15049 377 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 EGFLAMQ63HQ2 1017 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 ANO7Q6IWH7 933 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 COLCA1Q6ZS62 124 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 ANKRD13BQ86YJ7 626 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.35□□□□□ -1.71
CLOCK-207ENST00000508049 RSPRY1Q96DX4 576 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 THOC3Q96J01 351 aaKnown RBP4.35□□□□□ -1.71
CLOCK-207ENST00000508049 C17orf80Q9BSJ5 609 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 FAM234AQ9H0X4 552 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 CPA4Q9UI42 421 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 HS3ST3B1Q9Y662 390 aa4.35□□□□□ -1.71
CLOCK-207ENST00000508049 PMPCBO75439 489 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 SNUPNO95149 360 aaKnown RBP4.34□□□□□ -1.71
CLOCK-207ENST00000508049 THP07101 528 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 WNT3P56703 355 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 LMAN2Q12907 356 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 TMTC4Q5T4D3 741 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 LVRNQ6Q4G3 990 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 DEF8Q6ZN54 512 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 LIX1LQ8IVB5 337 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 SLC15A4Q8N697 577 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 ARFGAP1Q8N6T3 406 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 PPP2R3CQ969Q6 453 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 MTFMTQ96DP5 389 aaKnown RBP4.34□□□□□ -1.71
CLOCK-207ENST00000508049 CDK5RAP3Q96JB5 506 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 SMAD5Q99717 465 aaKnown RBP4.34□□□□□ -1.71
CLOCK-207ENST00000508049 ARMT1Q9H993 441 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 CNNM1Q9NRU3 951 aa4.34□□□□□ -1.71
CLOCK-207ENST00000508049 TULP3O75386 442 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 IL33O95760 270 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 TOMM40O96008 361 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 CDKN2AP42771 156 aaKnown RBP4.33□□□□□ -1.72
CLOCK-207ENST00000508049 LARS2Q15031 903 aaKnown RBP4.33□□□□□ -1.72
CLOCK-207ENST00000508049 SEC23BQ15437 767 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 PTCHD4Q6ZW05 846 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 DNAJC5GQ8N7S2 189 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 RBMXL3Q8N7X1 1067 aaKnown RBP4.33□□□□□ -1.72
CLOCK-207ENST00000508049 BPIFB1Q8TDL5 484 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 MVB12AQ96EY5 273 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 TRMOQ9BU70 441 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 GTPBP4Q9BZE4 634 aaKnown RBP4.33□□□□□ -1.72
CLOCK-207ENST00000508049 GBA2Q9HCG7 927 aaPredicted RBP4.33□□□□□ -1.72
CLOCK-207ENST00000508049 MED16Q9Y2X0 877 aa4.33□□□□□ -1.72
CLOCK-207ENST00000508049 PRSS44E7EML9 344 aa4.32□□□□□ -1.72
CLOCK-207ENST00000508049 GTPBP1O00178 669 aaKnown RBP4.32□□□□□ -1.72
CLOCK-207ENST00000508049 T-ENOLP0DO92 83 aa4.32□□□□□ -1.72
CLOCK-207ENST00000508049 CTSAP10619 480 aa4.32□□□□□ -1.72
CLOCK-207ENST00000508049 APEHP13798 732 aaKnown RBP4.32□□□□□ -1.72
CLOCK-207ENST00000508049 EVA1CP58658 441 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms