RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 GOLGA8DPQ0D2H9 430 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 RAPGEF1Q13905 1077 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 PRSS36Q5K4E3 855 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 RARS2Q5T160 578 aaKnown RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 PPP1R26Q5T8A7 1209 aaPredicted RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 PAQR9Q6ZVX9 377 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 RRAGAQ7L523 313 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 TMEM110Q86TL2 294 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 TMC8Q8IU68 726 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 TDRD5Q8NAT2 981 aaKnown RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 EPS8L1Q8TE68 723 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 DEPDC1BQ8WUY9 529 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 EXOC4Q96A65 974 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 TRIM11Q96F44 468 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 CALR3Q96L12 384 aaKnown RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 ARID3AQ99856 593 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 NCAPGQ9BPX3 1015 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 LRRC3Q9BY71 257 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 TASP1Q9H6P5 420 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 FAM207AQ9NSI2 230 aaPredicted RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 TMLHEQ9NVH6 421 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 IMPACTQ9P2X3 320 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 TSPAN16Q9UKR8 245 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 MRPS23Q9Y3D9 190 aaKnown RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 PCDHGC5Q9Y5F6 944 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 FHOD1Q9Y613 1164 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 MYO16Q9Y6X6 1858 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 SSU72P8A0A1W2PR75 194 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 SLC38A8A6NNN8 435 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 LINC01565O15544 149 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 THAP12O43422 761 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 ATP2C2O75185 946 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 ECI2O75521 394 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 OLFM2O95897 454 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 F11P03951 625 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 OR4Q2P0C623 313 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 RALAP11233 206 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 BMP1P13497 986 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 GLULP15104 373 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 CYP11B1P15538 503 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 DESP17661 470 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 GTF2F1P35269 517 aaKnown RBP eCLIP8.92□□□□□ -0.98
PDGFC-205ENST00000506880 CLCN1P35523 988 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 GPD2P43304 727 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 RAP1GAPP47736 663 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 GABRB2P47870 512 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 SLC5A3P53794 718 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 CDR2Q01850 454 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 LRMPQ12912 555 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 SFMBT2Q5VUG0 894 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 LLGL2Q6P1M3 1020 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 TMC5Q6UXY8 1006 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 TOGARAM2Q6ZUX3 1019 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 VSTM4Q8IW00 320 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.92□□□□□ -0.98
PDGFC-205ENST00000506880 UBALD2Q8IYN6 164 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 OR8K1Q8NGG5 319 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 IPO4Q8TEX9 1081 aaKnown RBP8.92□□□□□ -0.98
PDGFC-205ENST00000506880 BAP1Q92560 729 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 GOLGA1Q92805 767 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 OTUB2Q96DC9 234 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 PGLYRP2Q96PD5 576 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 TWNKQ96RR1 684 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 TMEM209Q96SK2 561 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 SMOQ99835 787 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 SLC4A5Q9BY07 1137 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 TRIM5Q9C035 493 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 DPEP3Q9H4B8 488 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 LRRC4Q9HBW1 653 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 ZNHIT6Q9NWK9 470 aaKnown RBP8.92□□□□□ -0.98
PDGFC-205ENST00000506880 IFNKQ9P0W0 207 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 DNMT3BQ9UBC3 853 aaKnown RBP8.92□□□□□ -0.98
PDGFC-205ENST00000506880 ZNF510Q9Y2H8 683 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 NME7Q9Y5B8 376 aa8.92□□□□□ -0.98
PDGFC-205ENST00000506880 EYSQ5T1H1 3165 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 KIF26AQ9ULI4 1882 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-205ENST00000506880 BDP1A6H8Y1 2624 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 HHLA1C9JL84 531 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 ANHXE9PGG2 379 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 M0QYV0 167 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 SLC9A3R1O14745 358 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-205ENST00000506880 CCL16O15467 120 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 CYP26A1O43174 497 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 RFPL2O75678 378 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 LATS1O95835 1130 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 ZBED1O96006 694 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 ERBB2P04626 1255 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 USP17L7P0C7H9 530 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 MYBL1P10243 752 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 LAMP2P13473 410 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 SLC7A9P82251 487 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 PFKPQ01813 784 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 ZP2Q05996 745 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 DLX2Q07687 328 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-205ENST00000506880 E2F5Q15329 346 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 CCDC85BQ15834 202 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-205ENST00000506880 ARHGAP44Q17R89 818 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 GOLGA7BQ2TAP0 167 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 HSP90AA4PQ58FG1 418 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms