RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SLC12A6Q9UHW9 1150 aa18.08■□□□□ 0.49
TRAPPC11-204ENST00000505676 CASP8AP2Q9UKL3 1982 aa18.08■□□□□ 0.49
TRAPPC11-204ENST00000505676 SCN1AP35498 2009 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 CFAP69A5D8W1 941 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 XPO1O14980 1071 aaKnown RBP18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 TGM2P21980 687 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 RPL9P32969 192 aaKnown RBP18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 LILRA4P59901 499 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 MAGOHP61326 146 aaKnown RBP18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 OTUD4Q01804 1114 aaKnown RBP18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 PLCB3Q01970 1234 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 STAT4Q14765 748 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 TRIP13Q15645 432 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 TNFAIP8L3Q5GJ75 292 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 SPATS2Q86XZ4 545 aaKnown RBP18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 TMEM130Q8N3G9 435 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 TRIB2Q92519 343 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 CFAP57Q96MR6 1250 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 ZNF670Q9BS34 389 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 FAM49BQ9NUQ9 324 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 FAM105AQ9NUU6 356 aa18.08■□□□□ 0.48
TRAPPC11-204ENST00000505676 SGK1O00141 431 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 SKIP12755 728 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 ZFXP17010 805 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 LSP1P33241 339 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 SMTNL2Q2TAL5 461 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 CCDC14Q49A88 953 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 DNAJC21Q5F1R6 531 aaKnown RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 C4orf22Q6V702 233 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 PSTKQ8IV42 348 aaKnown RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 RSAD2Q8WXG1 361 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 EPN3Q9H201 632 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 KLK14Q9P0G3 267 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 SQORQ9Y6N5 450 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 UTRNP46939 3433 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 PAPSS1O43252 624 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 CAND2O75155 1236 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 ZNF189O75820 626 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 CABYRO75952 493 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 SHBGP04278 402 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 HPDP32754 393 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 LHX1P48742 406 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 ATP1A2P50993 1020 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 IRX5P78411 483 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 KRT81Q14533 505 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 MRPL10Q7Z7H8 261 aaKnown RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 PCSK9Q8NBP7 692 aaKnown RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 HSPH1Q92598 858 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 CXCL16Q9H2A7 254 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 RNF39Q9H2S5 420 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 UBN1Q9NPG3 1134 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 PCSK1NQ9UHG2 260 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 PRDM4Q9UKN5 801 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 ST3GAL5Q9UNP4 418 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 TRIP11Q15643 1979 aa18.07■□□□□ 0.48
TRAPPC11-204ENST00000505676 MYADML2A6NDP7 307 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 RGS7P49802 495 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 CDH6P55285 790 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 MGAT3Q09327 533 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 GPS1Q13098 491 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 STRADAQ7RTN6 431 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 B3GALNT2Q8NCR0 500 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 KCTD13Q8WZ19 329 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 CENPIQ92674 756 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 FAM107BQ9H098 131 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 ABT1Q9ULW3 272 aaKnown RBP18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 NME7Q9Y5B8 376 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 PTGESO14684 152 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 GABRDO14764 452 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 SPTLC1O15269 473 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 ZNF623O75123 536 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 ADAMTS4O75173 837 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 THP07101 528 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 TSHRP16473 764 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 CTGFP29279 349 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 CHKAP35790 457 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 FLT3LGP49771 235 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 HNRNPH2P55795 449 aaKnown RBP18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 NOMO1Q15155 1222 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 KCNT1Q5JUK3 1230 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 RNASEH2BQ5TBB1 312 aaKnown RBP18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 GDF6Q6KF10 455 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 CXCL17Q6UXB2 119 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 CENPUQ71F23 418 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 PPIL6Q8IXY8 311 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 BCAS4Q8TDM0 211 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 RNF157Q96PX1 679 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 RBM15Q96T37 977 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 CALN1Q9BXU9 219 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 FRMD8Q9BZ67 464 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 ADAM7Q9H2U9 754 aa18.06■□□□□ 0.48
TRAPPC11-204ENST00000505676 ARHGEF37A1IGU5 675 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 FGFR1P11362 822 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 MMP13P45452 471 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 VPS41P49754 854 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 EIF3EP60228 445 aaKnown RBP18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 SOX4Q06945 474 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms