RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 FCRL6Q6DN72 434 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 NEK10Q6ZWH5 1172 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 TTC30AQ86WT1 665 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 TCP11L2Q8N4U5 519 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC17A8Q8NDX2 589 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 OR14K1Q8NGZ2 314 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZFP28Q8NHY6 868 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC35B2Q8TB61 432 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 UCMAQ8WVF2 138 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 WDR60Q8WVS4 1066 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 MBD6Q96DN6 1003 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 TREX2Q9BQ50 279 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 MESP1Q9BRJ9 268 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 LSM14BQ9BX40 385 aaKnown RBP4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 IMPG2Q9BZV3 1241 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 TWSG1Q9GZX9 223 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZCWPW1Q9H0M4 648 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 PI4KBQ9UBF8 816 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 HESX1Q9UBX0 185 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 AASSQ9UDR5 926 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 AGAP1Q9UPQ3 857 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 SHOC2Q9UQ13 582 aa4.41□□□□□ -1.7
TRAPPC13-208ENST00000505553 EFCAB8A8MWE9 144 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 H0Y3Z8 333 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 GPR42O15529 346 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZBED4O75132 1171 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 KIF20AO95235 890 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 VIPP01282 170 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 ATXN1LP0C7T5 689 aaKnown RBP4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZNF888P0CJ79 500 aaPredicted RBP4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 SRGAP2BP0DMP2 458 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 FDXRP22570 491 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 LRPAP1P30533 357 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 CSF2RBP32927 897 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 MCM2P49736 904 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 PRKAA2P54646 552 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 EPHB4P54760 987 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 NR1H2P55055 460 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 ADAM8P78325 824 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 HGFACQ04756 655 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 FOXE3Q13461 319 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 NFYCQ13952 458 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 ANKRD1Q15327 319 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 BMT2Q1RMZ1 405 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 ATXN7L2Q5T6C5 722 aaPredicted RBP4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLFN13Q68D06 897 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 NFRKBQ6P4R8 1299 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 BBS12Q6ZW61 710 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 PPP1R32Q7Z5V6 425 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 FAM9BQ8IZU0 186 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 NGDNQ8NEJ9 315 aaKnown RBP4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 TMIEQ8NEW7 156 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 SCAMP5Q8TAC9 235 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 TBC1D15Q8TC07 691 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 GRAMD1AQ96CP6 724 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 RRP36Q96EU6 259 aaKnown RBP4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 FAM227BQ96M60 508 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 TIGD1Q96MW7 591 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 C7orf26Q96N11 449 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 GPHA2Q96T91 129 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 NUDT16L1Q9BRJ7 211 aaKnown RBP4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 TMEM160Q9NX00 188 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 LPAR3Q9UBY5 353 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 ADAM29Q9UKF5 820 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 CLCA2Q9UQC9 943 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 HDAC5Q9UQL6 1122 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 ATP11BQ9Y2G3 1177 aa4.4□□□□□ -1.7
TRAPPC13-208ENST00000505553 CDHR4A6H8M9 788 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 OR2W5A6NFC9 320 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 CCER2I3L3R5 266 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 HOXA3O43365 443 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 RRP9O43818 475 aaKnown RBP4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 PIAS2O75928 621 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 ANXA6P08133 673 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 RXRAP19793 462 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 MST1P26927 711 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 MCM7P33993 719 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 KRT17Q04695 432 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 PIGFQ07326 219 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 ATP1A4Q13733 1029 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZNF750Q32MQ0 723 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 AGAP9Q5VTM2 703 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 CACHD1Q5VU97 1274 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 RINT1Q6NUQ1 792 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 C16orf54Q6UWD8 224 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 LAYNQ6UX15 382 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 ANKS1BQ7Z6G8 1248 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 USP38Q8NB14 1042 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 OR1N1Q8NGS0 311 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 CEP70Q8NHQ1 597 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 CPT1BQ92523 772 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 GOLGA1Q92805 767 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 C3orf49Q96BT1 292 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 NEIL1Q96FI4 390 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZNF668Q96K58 619 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 KLHL32Q96NJ5 620 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 TWNKQ96RR1 684 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 CRAMP1Q96RY5 1269 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 SERINC2Q96SA4 455 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 SMOQ99835 787 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms