RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 HMGA1P17096 107 aaKnown RBP17.87■□□□□ 0.45
SYNE4-207ENST00000505054 KCNMA1Q12791 1236 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 VEPH1Q14D04 833 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 TPRG1Q6ZUI0 275 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 ITIH5Q86UX2 942 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 FAM200AQ8TCP9 573 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 ING5Q8WYH8 240 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 TCEAL4Q96EI5 215 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 TMEM176AQ96HP8 235 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 UBE2TQ9NPD8 197 aaPredicted RBP17.87■□□□□ 0.45
SYNE4-207ENST00000505054 ASAH2Q9NR71 780 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 KRT82Q9NSB4 513 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 APEX2Q9UBZ4 518 aa17.87■□□□□ 0.45
SYNE4-207ENST00000505054 AJAP1Q9UKB5 411 aaPredicted RBP17.87■□□□□ 0.45
SYNE4-207ENST00000505054 MRPS23Q9Y3D9 190 aaKnown RBP17.87■□□□□ 0.45
SYNE4-207ENST00000505054 MTF2Q9Y483 593 aaPredicted RBP17.87■□□□□ 0.45
SYNE4-207ENST00000505054 PTPRDP23468 1912 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 LRRC10BA6NIK2 292 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 FAM170BA6NMN3 283 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 LGALS16A8MUM7 142 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 F8VP50 259 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 MOSPD3O75425 235 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 MYL4P12829 197 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 CEBPBP17676 345 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 CDK11BP21127 795 aaKnown RBP17.86■□□□□ 0.45
SYNE4-207ENST00000505054 ADORA2BP29275 332 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 GRIK1P39086 918 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 ZNF132P52740 706 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 POTEHQ6S545 545 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 PDZD4Q76G19 769 aaPredicted RBP17.86■□□□□ 0.45
SYNE4-207ENST00000505054 LUZP1Q86V48 1076 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 LEMD2Q8NC56 503 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 ANKRD20A12PQ8NF67 263 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 CYFIP2Q96F07 1278 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 SMARCD1Q96GM5 515 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 C8orf48Q96LL4 319 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 HNRNPABQ99729 332 aaKnown RBP17.86■□□□□ 0.45
SYNE4-207ENST00000505054 MED10Q9BTT4 135 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 IL21Q9HBE4 155 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 GDE1Q9NZC3 331 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 NCDNQ9UBB6 729 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 PCDHB4Q9Y5E5 795 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 ATP8B3O60423 1300 aa17.86■□□□□ 0.45
SYNE4-207ENST00000505054 SLC38A8A6NNN8 435 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 BECN2A8MW95 431 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 RNF225M0QZC1 329 aaPredicted RBP17.85■□□□□ 0.45
SYNE4-207ENST00000505054 TRIM66O15016 1216 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 NCAM2O15394 837 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 AP1G2O75843 785 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 NOL4O94818 638 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 CAVIN2O95810 425 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 TRIM21P19474 475 aaKnown RBP17.85■□□□□ 0.45
SYNE4-207ENST00000505054 RPS9P46781 194 aaKnown RBP17.85■□□□□ 0.45
SYNE4-207ENST00000505054 CSTF1Q05048 431 aaKnown RBP17.85■□□□□ 0.45
SYNE4-207ENST00000505054 PPP1R26Q5T8A7 1209 aaPredicted RBP17.85■□□□□ 0.45
SYNE4-207ENST00000505054 TMEM270Q6UE05 265 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 TICRRQ7Z2Z1 1910 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 RBBP8NLQ8NC74 664 aaPredicted RBP17.85■□□□□ 0.45
SYNE4-207ENST00000505054 ZBTB44Q8NCP5 570 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 ZMIZ2Q8NF64 920 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 SHKBP1Q8TBC3 707 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 CLDN23Q96B33 292 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 SPATA17Q96L03 361 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 HEXIM2Q96MH2 286 aaKnown RBP17.85■□□□□ 0.45
SYNE4-207ENST00000505054 NELL2Q99435 816 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 SMOQ99835 787 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 ZSCAN32Q9NX65 697 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 CNTN6Q9UQ52 1028 aa17.85■□□□□ 0.45
SYNE4-207ENST00000505054 BEST1O76090 585 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 TPM2P07951 284 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 CSH1P0DML2 217 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 CSH2P0DML3 217 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 GJA1P17302 382 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 CD72P21854 359 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 TARSP26639 723 aaKnown RBP17.84■□□□□ 0.45
SYNE4-207ENST00000505054 ANXA13P27216 316 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 CYP4A22Q5TCH4 519 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 ARHGAP17Q68EM7 881 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 LRSAM1Q6UWE0 723 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 GAREM2Q75VX8 874 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 ENOSF1Q7L5Y1 443 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 GPR161Q8N6U8 529 aaKnown RBP17.84■□□□□ 0.45
SYNE4-207ENST00000505054 ATRIPQ8WXE1 791 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 NELL1Q92832 810 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 DNASE1L2Q92874 299 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 SECISBP2LQ93073 1101 aaKnown RBP17.84■□□□□ 0.45
SYNE4-207ENST00000505054 JAKMIP2Q96AA8 810 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 ELSPBP1Q96BH3 223 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 KCNK16Q96T55 309 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 LSM14BQ9BX40 385 aaKnown RBP17.84■□□□□ 0.45
SYNE4-207ENST00000505054 DNAI2Q9GZS0 605 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 EPC1Q9H2F5 836 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 CSNK1G1Q9HCP0 422 aa17.84■□□□□ 0.45
SYNE4-207ENST00000505054 DMAP1Q9NPF5 467 aaPredicted RBP17.84■□□□□ 0.45
SYNE4-207ENST00000505054 PRMT8Q9NR22 394 aaPredicted RBP17.84■□□□□ 0.45
SYNE4-207ENST00000505054 SMG5Q9UPR3 1016 aaKnown RBP17.84■□□□□ 0.45
SYNE4-207ENST00000505054 MRPS17Q9Y2R5 130 aaKnown RBP17.84■□□□□ 0.45
SYNE4-207ENST00000505054 NCOR2Q9Y618 2525 aa17.83■□□□□ 0.45
SYNE4-207ENST00000505054 A0A1W2PRU2 124 aa17.83■□□□□ 0.44
SYNE4-207ENST00000505054 ZNF197O14709 1029 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms