RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 PLEKHG4BQ96PX9 1271 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 EDEM3Q9BZQ6 932 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ANKRD2Q9GZV1 360 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 BLOC1S4Q9NUP1 217 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 UTP6Q9NYH9 597 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 EURLQ9NYK6 297 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 TAS2R1Q9NYW7 299 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 MYO10Q9HD67 2058 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 MYH6P13533 1939 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 O00370 1275 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 CAPN1P07384 714 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 VIL1P09327 827 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 TMEM191BP0C7N4 346 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 POLR2MP0CAP2 368 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 RGS7P49802 495 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 CDH6P55285 790 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 C21orf59P57076 290 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 WDR4P57081 412 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 EIF3EP60228 445 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 DLG4P78352 724 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ITKQ08881 620 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ITGA9Q13797 1035 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 HADHQ16836 314 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 LACTB2Q53H82 288 aaPredicted RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ZNF804AQ7Z570 1209 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 LNX1Q8TBB1 728 aaPredicted RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 SCFD2Q8WU76 684 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 NAT14Q8WUY8 206 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 HDAC2Q92769 488 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 WNT8AQ9H1J5 351 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 COQ3Q9NZJ6 369 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 SLC12A4Q9UP95 1085 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 AP4E1Q9UPM8 1137 aa8.12□□□□□ -1.11
ATP2C1-208ENST00000504948 ATXN2Q99700 1313 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 CLRN2A0PK11 232 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 LAD1O00515 517 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 TOP3BO95985 862 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 TMEM253P0C7T8 217 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 SEPHS1P49903 392 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 GTF2A2P52657 109 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 NME3Q13232 169 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 FASTKD1Q53R41 847 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 PLA2G4FQ68DD2 849 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 ATG14Q6ZNE5 492 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 CHST15Q7LFX5 561 aaPredicted RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 GPR141Q7Z602 305 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 CBWD2Q8IUF1 395 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 MIER2Q8N344 545 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 CNDP1Q96KN2 507 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 TBATAQ96M53 351 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 SERPINI1Q99574 410 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 SEPHS2Q99611 448 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 MTG1Q9BT17 334 aaPredicted RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 BEGAINQ9BUH8 593 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 SMG5Q9UPR3 1016 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 MYH13Q9UKX3 1938 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 MAP3K15Q6ZN16 1313 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 FAM149AA5PLN7 773 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 GM2AP17900 193 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 NKX2-5P52952 324 aaPredicted RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 GSTO1P78417 241 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 MAPK6Q16659 721 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 ABCB5Q2M3G0 1257 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 SLC27A3Q5K4L6 730 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 DUPD1Q68J44 220 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 ARHGEF19Q8IW93 802 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 CD302Q8IX05 232 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 ULK2Q8IYT8 1036 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 ADGRF4Q8IZF3 695 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 PHC3Q8NDX5 983 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 PNMA5Q96PV4 448 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 TUBB6Q9BUF5 446 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 UPF3AQ9H1J1 476 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 MIR1-1HGQ9H1L0 117 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 MAGEF1Q9HAY2 307 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 AJAP1Q9UKB5 411 aaPredicted RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 DIS3Q9Y2L1 958 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 H3BSA7 217 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 KRT8P05787 483 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 P4HA1P13674 534 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 PLK1P53350 603 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 YARSP54577 528 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 TLDC1Q6P9B6 456 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 DDIASQ8IXT1 998 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 CEP170P1Q96L14 293 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 TRAPPC9Q96Q05 1148 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 SPATA16Q9BXB7 569 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 ITM2CQ9NQX7 267 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 KRT38O76015 456 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 SORBS2O94875 1100 aaKnown RBP8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 LCA5LO95447 670 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 TSPAN8P19075 237 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 GNA15P30679 374 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 CDC16Q13042 620 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 PLCL1Q15111 1095 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 QRICH1Q2TAL8 776 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 WASHC2DQ5SRD0 308 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 RHOT1Q8IXI2 618 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 SPATA18Q8TC71 538 aa8.11□□□□□ -1.11
ATP2C1-208ENST00000504948 VPS50Q96JG6 964 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms