RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TMEM191BP0C7N4 346 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 MBL2P11226 248 aaPredicted RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 HOXB2P14652 356 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 BDNFP23560 247 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 ANXA13P27216 316 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 PCSK1P29120 753 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 DDIT3P35638 169 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 UBA7P41226 1012 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 DPP6P42658 865 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 KIR2DL1P43626 348 aaPredicted RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 PDE6CP51160 858 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 ZNF131P52739 623 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 USP46P62068 366 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 GTF2BQ00403 316 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 ZNF33AQ06730 810 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 BYSLQ13895 437 aaKnown RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 DSG2Q14126 1118 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 ZNF423Q2M1K9 1284 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 CFAP221Q4G0U5 840 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 SOWAHCQ53LP3 525 aaPredicted RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 RILPL1Q5EBL4 403 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 LY6G5CQ5SRR4 150 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 CRELD2Q6UXH1 353 aaPredicted RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 C4orf50Q6ZRC1 276 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 SFR1Q86XK3 245 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 BRSK2Q8IWQ3 736 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 PLPP6Q8IY26 295 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 RGL4Q8IZJ4 473 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 TMEM86AQ8N2M4 240 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 CSGALNACT2Q8N6G5 542 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 ZNF513Q8N8E2 541 aaPredicted RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 NAT16Q8N8M0 369 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 C1orf127Q8N9H9 656 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 HNRNPLLQ8WVV9 542 aaKnown RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 FUBP3Q96I24 572 aaKnown RBP eCLIP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 HSPA12BQ96MM6 686 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 FIZ1Q96SL8 496 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 MTMR12Q9C0I1 747 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 BLOC1S4Q9NUP1 217 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 RBAKQ9NYW8 714 aaPredicted RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 TBC1D7Q9P0N9 293 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 CALCOCO1Q9P1Z2 691 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 MAGEC2Q9UBF1 373 aaPredicted RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 CYP8B1Q9UNU6 501 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 R3HCC1Q9Y3T6 440 aaKnown RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 GPSM3Q9Y4H4 160 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 PCDHB9Q9Y5E1 797 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 FASNP49327 2511 aaKnown RBP7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 ADAMTS20P59510 1910 aa7.37□□□□□ -1.23
NPIPB3-203ENST00000504841 GON4LQ3T8J9 2241 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 FRYQ5TBA9 3013 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 PKD1L2Q7Z442 2459 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 TBC1D3BA6NDS4 549 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 ZNF840PA6NDX5 716 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 EIF4E1BA6NMX2 242 aaKnown RBP7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 ARHGAP33O14559 1287 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 SLC9A3R1O14745 358 aaPredicted RBP7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 PDGFRBP09619 1106 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 FTH1P19P0C7X4 201 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 CD59P13987 128 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 TCF3P15923 654 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 GABRG2P18507 467 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 SCP2P22307 547 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 ADSSP30520 456 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 GRIA2P42262 883 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 MAGEA11P43364 429 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 POSTNQ15063 836 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 TRIP6Q15654 476 aaKnown RBP7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 PLEKHG6Q3KR16 790 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 HSF5Q4G112 596 aaPredicted RBP7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 MDH1BQ5I0G3 518 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 C10orf76Q5T2E6 689 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 BTBD8Q5XKL5 378 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 SLC36A4Q6YBV0 504 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 DENND5BQ6ZUT9 1274 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 HS2ST1Q7LGA3 356 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 DYMQ7RTS9 669 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 RAB44Q7Z6P3 723 aaPredicted RBP7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 NT5DC4Q86YG4 428 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 KCTD17Q8N5Z5 321 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 LRRC52Q8N7C0 313 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 KRI1Q8N9T8 703 aaKnown RBP7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 TRIML1Q8N9V2 468 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 ZSWIM2Q8NEG5 633 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 CEP76Q8TAP6 659 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 MDM1Q8TC05 714 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 RAD54LQ92698 747 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 KCNN1Q92952 543 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 LRIG1Q96JA1 1093 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 RNF38Q9H0F5 515 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 CCDC86Q9H6F5 360 aaKnown RBP7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 CAPN10Q9HC96 672 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 CD93Q9NPY3 652 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 ITGA11Q9UKX5 1188 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 RAXQ9Y2V3 346 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 PCNX2A6NKB5 2137 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 PI4KAP42356 2102 aa7.36□□□□□ -1.23
NPIPB3-203ENST00000504841 PCDH15Q96QU1 1955 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms