RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 RUBCNQ92622 972 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 VCPIP1Q96JH7 1222 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 TTYH3Q9C0H2 523 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 BTAF1O14981 1849 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 GLI3P10071 1580 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 ADGRA3Q8IWK6 1321 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 UBA6A0AVT1 1052 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-207ENST00000504761 CHN1P15882 459 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 YWHAZP63104 245 aaKnown RBP14.67□□□□□ -0.06
TCOF1-207ENST00000504761 DENND5BQ6ZUT9 1274 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 RASSF3Q86WH2 238 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 TRIM42Q8IWZ5 723 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 ARHGAP24Q8N264 748 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 PABPC3Q9H361 631 aaKnown RBP14.67□□□□□ -0.06
TCOF1-207ENST00000504761 WDR70Q9NW82 654 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 CFAP69A5D8W1 941 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 TMEM88BA6NKF7 163 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 DPYSL4O14531 572 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 ALDH1A3P47895 512 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 SESN3P58005 492 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 GPATCH11Q8N954 259 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 C3orf20Q8ND61 904 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 PRMT1Q99873 361 aaKnown RBP14.67□□□□□ -0.06
TCOF1-207ENST00000504761 AVENQ9NQS1 362 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-207ENST00000504761 PIH1D1Q9NWS0 290 aaKnown RBP14.67□□□□□ -0.06
TCOF1-207ENST00000504761 TELO2Q9Y4R8 837 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 HMGCRP04035 888 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 STIP1P31948 543 aaKnown RBP14.67□□□□□ -0.06
TCOF1-207ENST00000504761 SNX17Q15036 470 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 NLRP14Q86W24 1093 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 CFAP61Q8NHU2 1237 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 HELQQ8TDG4 1101 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 ALG3Q92685 438 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.67□□□□□ -0.063e-9■■■■■ 78.5
TCOF1-207ENST00000504761 CELF6Q96J87 481 aaKnown RBP14.67□□□□□ -0.06
TCOF1-207ENST00000504761 DMAC2Q9NW81 257 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 DNPEPQ9ULA0 475 aa14.67□□□□□ -0.06
TCOF1-207ENST00000504761 MYH3P11055 1940 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 USP17L7P0C7H9 530 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 SETSIPP0DME0 302 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 NOMO3P69849 1222 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 NR1H3Q13133 447 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 SPATS2Q86XZ4 545 aaKnown RBP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 PPIL6Q8IXY8 311 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 TFB1MQ8WVM0 346 aaKnown RBP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 UBP1Q9NZI7 540 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 FAM8A1Q9UBU6 413 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 TUBGCP4Q9UGJ1 667 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 AJAP1Q9UKB5 411 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 ZSCAN5DPP0CG00 497 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 CCNG2Q16589 344 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 DDX27Q96GQ7 796 aaKnown RBP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 KCND1Q9NSA2 647 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 ANGPTL3Q9Y5C1 460 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 C10orf71Q711Q0 1435 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 TCP11X1B4DZS4 312 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 ZBTB24O43167 697 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 GMNNO75496 209 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 HSPA4LO95757 839 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 DARSP14868 501 aaKnown RBP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 AMPD1P23109 780 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 MDH1P40925 334 aaKnown RBP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 PRUNE1Q86TP1 453 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 EIF2AQ9BY44 585 aaKnown RBP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 ULBP1Q9BZM6 244 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 RPTORQ8N122 1335 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 H3BQF6 201 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 MCL1Q07820 350 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 CNGA2Q16280 664 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 LRRN4Q8WUT4 740 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 YME1L1Q96TA2 773 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 CDC42EP4Q9H3Q1 356 aaKnown RBP14.66□□□□□ -0.06
TCOF1-207ENST00000504761 ST6GALNAC4Q9H4F1 302 aa14.66□□□□□ -0.06
TCOF1-207ENST00000504761 CLDN5O00501 218 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 CLGNO14967 610 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 C4BPAP04003 597 aaKnown RBP14.65□□□□□ -0.06
TCOF1-207ENST00000504761 RPL21P46778 160 aaKnown RBP14.65□□□□□ -0.06
TCOF1-207ENST00000504761 CRHR2Q13324 411 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 HIBCHQ6NVY1 386 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-207ENST00000504761 NT5DC4Q86YG4 428 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 EFHBQ8N7U6 833 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 ALKBH8Q96BT7 664 aaKnown RBP14.65□□□□□ -0.06
TCOF1-207ENST00000504761 CHMP6Q96FZ7 201 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 PPARGC1AQ9UBK2 798 aaKnown RBP14.65□□□□□ -0.06
TCOF1-207ENST00000504761 KCNK1O00180 336 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 SASH3O75995 380 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 ENDOD1O94919 500 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 AGTP01019 485 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 CYP2F1P24903 491 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 NOVP48745 357 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 NUDCD3Q8IVD9 361 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 C1orf127Q8N9H9 656 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 MUC3BQ9H195 1237 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 TMEM120BA0PK00 339 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 JCHAINP01591 159 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 ASGR1P07306 291 aa14.65□□□□□ -0.06
TCOF1-207ENST00000504761 PTPN1P18031 435 aaKnown RBP14.65□□□□□ -0.06
TCOF1-207ENST00000504761 CRYBB1P53674 252 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms