RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 ITFG1Q8TB96 612 aa19.2■□□□□ 0.66
DDR1-254ENST00000504679 SLC35F5Q8WV83 523 aa19.2■□□□□ 0.66
DDR1-254ENST00000504679 CPLX3Q8WVH0 158 aa19.2■□□□□ 0.66
DDR1-254ENST00000504679 TCEAL4Q96EI5 215 aa19.2■□□□□ 0.66
DDR1-254ENST00000504679 RPGRIP1Q96KN7 1286 aa19.2■□□□□ 0.66
DDR1-254ENST00000504679 NUCKS1Q9H1E3 243 aaKnown RBP19.2■□□□□ 0.66
DDR1-254ENST00000504679 IL21Q9HBE4 155 aa19.2■□□□□ 0.66
DDR1-254ENST00000504679 PCDHGC3Q9UN70 934 aa19.2■□□□□ 0.66
DDR1-254ENST00000504679 NOTCH4Q99466 2003 aa19.2■□□□□ 0.66
DDR1-254ENST00000504679 ITIH6Q6UXX5 1313 aa19.2■□□□□ 0.66
DDR1-254ENST00000504679 SPTBN5Q9NRC6 3674 aaKnown RBP19.2■□□□□ 0.66
DDR1-254ENST00000504679 GREB1Q4ZG55 1949 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 A0A1W2PQJ5 194 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 CCR2P41597 374 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 GPD2P43304 727 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 PLA2G4AP47712 749 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 KIF11P52732 1056 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 ARID5AQ03989 594 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 TAF10Q12962 218 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 SPECC1LQ69YQ0 1117 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 GAREM2Q75VX8 874 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 ADHFE1Q8IWW8 467 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 KCTD13Q8WZ19 329 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 OVCA2Q8WZ82 227 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 BAP1Q92560 729 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 MRPS31Q92665 395 aaKnown RBP19.19■□□□□ 0.66
DDR1-254ENST00000504679 FGF13Q92913 245 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 SECISBP2LQ93073 1101 aaKnown RBP19.19■□□□□ 0.66
DDR1-254ENST00000504679 LHX5Q9H2C1 402 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 LRRC4Q9HBW1 653 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 GDE1Q9NZC3 331 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 TRPM5Q9NZQ8 1165 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 ZMYM5Q9UJ78 669 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 CDH7Q9ULB5 785 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 CAPN11Q9UMQ6 739 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 LUC7L2Q9Y383 392 aaKnown RBP19.19■□□□□ 0.66
DDR1-254ENST00000504679 CEP83Q9Y592 693 aa19.19■□□□□ 0.66
DDR1-254ENST00000504679 MOSPD3O75425 235 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 SLC34A2O95436 690 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 GJA1P17302 382 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 SFMBT2Q5VUG0 894 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 DENND1BQ6P3S1 775 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 PDZD8Q8NEN9 1154 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 SHKBP1Q8TBC3 707 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 STK32AQ8WU08 396 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 ING5Q8WYH8 240 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 FBXO32Q969P5 355 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 MCRS1Q96EZ8 462 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 HSFY1Q96LI6 401 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 TTYH3Q9C0H2 523 aa19.18■□□□□ 0.66
DDR1-254ENST00000504679 CHORDC1Q9UHD1 332 aaPredicted RBP19.18■□□□□ 0.66
DDR1-254ENST00000504679 TCF20Q9UGU0 1960 aaKnown RBP19.17■□□□□ 0.66
DDR1-254ENST00000504679 FAM92AA1XBS5 289 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 LRRC53A6NM62 1247 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 SOBPA7XYQ1 873 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 TULP2O00295 520 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 AP5Z1O43299 807 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 ABL1P00519 1130 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 CFHP08603 1231 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 TPM1P09493 284 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 LAMP2P13473 410 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 CEBPBP17676 345 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 DDX6P26196 483 aaKnown RBP eCLIP19.17■□□□□ 0.66
DDR1-254ENST00000504679 TKTL1P51854 596 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 ZBED6P86452 979 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 TRIM14Q14142 442 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 TEAD2Q15562 447 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 RAB41Q5JT25 222 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 TAF3Q5VWG9 929 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 PMF1Q6P1K2 205 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 NOP9Q86U38 636 aaKnown RBP19.17■□□□□ 0.66
DDR1-254ENST00000504679 VSTM4Q8IW00 320 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 TDRD5Q8NAT2 981 aaKnown RBP19.17■□□□□ 0.66
DDR1-254ENST00000504679 EPS8L1Q8TE68 723 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 DDX1Q92499 740 aaKnown RBP19.17■□□□□ 0.66
DDR1-254ENST00000504679 NOX5Q96PH1 765 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 MYADMQ96S97 322 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 SLITRK6Q9H5Y7 841 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 AIPL1Q9NZN9 384 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 SCML2Q9UQR0 700 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 USP3Q9Y6I4 520 aa19.17■□□□□ 0.66
DDR1-254ENST00000504679 ZNF638Q14966 1978 aaKnown RBP19.17■□□□□ 0.66
DDR1-254ENST00000504679 LOC730098B7Z3J9 87 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 SP100P23497 879 aaPredicted RBP19.16■□□□□ 0.66
DDR1-254ENST00000504679 ACADSBP45954 432 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 SNX16P57768 344 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 CDR2Q01850 454 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 ASIC2Q16515 512 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 GPR158Q5T848 1215 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 GPRIN1Q7Z2K8 1008 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 IRF2BP2Q7Z5L9 587 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 TMEM150AQ86TG1 271 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 MON1AQ86VX9 555 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 NPAS3Q8IXF0 933 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 ZDHHC14Q8IZN3 488 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 TMEM35BQ8NCS4 154 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 TASP1Q9H6P5 420 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 TLR8Q9NR97 1041 aaKnown RBP19.16■□□□□ 0.66
DDR1-254ENST00000504679 ST7Q9NRC1 585 aa19.16■□□□□ 0.66
DDR1-254ENST00000504679 EPS15L1Q9UBC2 864 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms