RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 PELI3Q8N2H9 469 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 LPAR1Q92633 364 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 TADA1Q96BN2 335 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 PRICKLE1Q96MT3 831 aaPredicted RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 OSBPL8Q9BZF1 889 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 KATNBL1Q9H079 304 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 ZNF696Q9H7X3 374 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 DNAJC28Q9NX36 388 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 KIAA1522Q9P206 1035 aaPredicted RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 PLLPQ9Y342 182 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 NFIBO00712 420 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 DCTN3O75935 186 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 PSMG1O95456 288 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 HOXC8P31273 242 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CRHR1P34998 444 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 GEMIN4P57678 1058 aaKnown RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 PSMC5P62195 406 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 MAP2K1Q02750 393 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 RFTN1Q14699 578 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 TBCCQ15814 346 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 SLC14A2Q15849 920 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 ZBTB6Q15916 424 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 LDLRAD1Q5T700 205 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 DCLRE1AQ6PJP8 1040 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 MFSD7Q6UXD7 560 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 GADL1Q6ZQY3 521 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 TSHZ1Q6ZSZ6 1077 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CHSY3Q70JA7 882 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 WDR49Q8IV35 697 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 FEZF2Q8TBJ5 459 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 ACTRT2Q8TDY3 377 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 FAM172AQ8WUF8 416 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 TFAP2BQ92481 460 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 KLRG1Q96E93 195 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CSRNP1Q96S65 589 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 BEGAINQ9BUH8 593 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 INO80BQ9C086 356 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 AS3MTQ9HBK9 375 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 PICK1Q9NRD5 415 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 BMP2KQ9NSY1 1161 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 DNAJC25-GNG10A0A024R161 153 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 PRSS51A0A1B0GVH4 220 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 MANSC4A6NHS7 340 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 CNMDO75829 334 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 FAM163BP0C2L3 166 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CCDC130P13994 396 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 BRAFP15056 766 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 ACVR2AP27037 513 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 ZNF157P51786 506 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 YWHAZP63104 245 aaKnown RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 WASHC5Q12768 1159 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 PICALMQ13492 652 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 TFDP3Q5H9I0 405 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 ACAD11Q709F0 780 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 BHLHA9Q7RTU4 235 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 SAPCD2Q86UD0 394 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 EGFL6Q8IUX8 553 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 THNSL1Q8IYQ7 743 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CCDC89Q8N998 374 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CDK5RAP3Q96JB5 506 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CCDC114Q96M63 670 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 SENP6Q9GZR1 1112 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 NSRP1Q9H0G5 558 aaKnown RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 DDX56Q9NY93 547 aaKnown RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 ZNF639Q9UID6 485 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CDH7Q9ULB5 785 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 GMEB1Q9Y692 573 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CENPFP49454 3210 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 RBM47A0AV96 593 aaKnown RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 APOC4-APOC2K7ER74 178 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 TRDMT1O14717 391 aaKnown RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 GCATO75600 419 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 KIAA0754O94854 1291 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 LUC7L3O95232 432 aaKnown RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 ALDH1A1P00352 501 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 APOC2P02655 101 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 C8BP07358 591 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 POLR2MP0CAP2 368 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 NAMPTP43490 491 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 ALDH3B2P48448 385 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 LIMK1P53667 647 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 RPL7AP62424 266 aaKnown RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 SEMA5AQ13591 1074 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 ZNF423Q2M1K9 1284 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 NBPF12Q5TAG4 269 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 IZUMO3Q5VZ72 239 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 CST9Q5W186 159 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 SDCCAG8Q86SQ7 713 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 CCDC117Q8IWD4 279 aaPredicted RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 CNTN4Q8IWV2 1026 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 NME8Q8N427 588 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 WNK4Q96J92 1243 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 FZD8Q9H461 694 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 PIDD1Q9HB75 910 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 SLC17A7Q9P2U7 560 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 MTRF1LQ9UGC7 380 aaKnown RBP6.68□□□□□ -1.34
COPB2-204ENST00000504295 GJD2Q9UKL4 321 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 FRMD4BQ9Y2L6 1034 aa6.68□□□□□ -1.34
COPB2-204ENST00000504295 SFI1A8K8P3 1242 aa6.67□□□□□ -1.34
COPB2-204ENST00000504295 SPATA31D3P0C874 917 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms