RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 TRDMT1O14717 391 aaKnown RBP23.42■■□□□ 1.34
LSM6-203ENST00000503982 ATG13O75143 517 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 RTN3O95197 1032 aaPredicted RBP23.42■■□□□ 1.34
LSM6-203ENST00000503982 NFATC1O95644 943 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 EGFP01133 1207 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 MBL2P11226 248 aaPredicted RBP23.42■■□□□ 1.34
LSM6-203ENST00000503982 RPL13P26373 211 aaKnown RBP23.42■■□□□ 1.34
LSM6-203ENST00000503982 GJA4P35212 333 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 GALK1P51570 392 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 ORC1Q13415 861 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 ZACNQ401N2 412 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 TMEM196Q5HYL7 178 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 LONP2Q86WA8 852 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 FAM186BQ8IYM0 893 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 TTLL2Q9BWV7 592 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 TRAF3IP3Q9Y228 551 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 CPQQ9Y646 472 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 MYO16Q9Y6X6 1858 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 ZNF292O60281 2723 aa23.42■■□□□ 1.34
LSM6-203ENST00000503982 OTOGLQ3ZCN5 2332 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 FAM237AA0A1B0GTK4 181 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 ZNF840PA6NDX5 716 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 RNF40O75150 1001 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 AP1G2O75843 785 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 HLA-DRAP01903 254 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 PFKLP17858 780 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 DRD1P21728 446 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 CLDN10P78369 228 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 EML3Q32P44 896 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 SPOPLQ6IQ16 392 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 SV2AQ7L0J3 742 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.41■■□□□ 1.34
LSM6-203ENST00000503982 CD101Q93033 1021 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 SMARCD1Q96GM5 515 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 SDCBP2Q9H190 292 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 DMAP1Q9NPF5 467 aaPredicted RBP23.41■■□□□ 1.34
LSM6-203ENST00000503982 C2orf42Q9NWW7 574 aa23.41■■□□□ 1.34
LSM6-203ENST00000503982 TRIM49P0CI25 452 aa23.4■■□□□ 1.34
LSM6-203ENST00000503982 TRIM49CP0CI26 452 aa23.4■■□□□ 1.34
LSM6-203ENST00000503982 NDST1P52848 882 aa23.4■■□□□ 1.34
LSM6-203ENST00000503982 SRSF5Q13243 272 aaKnown RBP23.4■■□□□ 1.34
LSM6-203ENST00000503982 INTS8Q75QN2 995 aaKnown RBP23.4■■□□□ 1.34
LSM6-203ENST00000503982 GPR161Q8N6U8 529 aaKnown RBP23.4■■□□□ 1.34
LSM6-203ENST00000503982 CCDC150Q8NCX0 1101 aa23.4■■□□□ 1.34
LSM6-203ENST00000503982 PDZD8Q8NEN9 1154 aa23.4■■□□□ 1.34
LSM6-203ENST00000503982 TAF4BQ92750 862 aa23.4■■□□□ 1.34
LSM6-203ENST00000503982 KCNK16Q96T55 309 aa23.4■■□□□ 1.34
LSM6-203ENST00000503982 LINC00597Q9H2U6 94 aa23.4■■□□□ 1.34
LSM6-203ENST00000503982 TMEM30AQ9NV96 361 aa23.4■■□□□ 1.34
LSM6-203ENST00000503982 K7ESF4 209 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 IKBKBO14920 756 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 PAPSS2O95340 614 aaPredicted RBP23.39■■□□□ 1.33
LSM6-203ENST00000503982 GCLMP48507 274 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 PXNP49023 591 aaPredicted RBP23.39■■□□□ 1.33
LSM6-203ENST00000503982 ADAM9Q13443 819 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 NAIF1Q69YI7 327 aaPredicted RBP23.39■■□□□ 1.33
LSM6-203ENST00000503982 LAIR1Q6GTX8 287 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 PKN3Q6P5Z2 889 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 GUF1Q8N442 669 aaKnown RBP23.39■■□□□ 1.33
LSM6-203ENST00000503982 NACA2Q9H009 215 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 RNF38Q9H0F5 515 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 KRT82Q9NSB4 513 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 FAM49BQ9NUQ9 324 aa23.39■■□□□ 1.33
LSM6-203ENST00000503982 CHORDC1Q9UHD1 332 aaPredicted RBP23.39■■□□□ 1.33
LSM6-203ENST00000503982 FRYLO94915 3013 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 SCAMP3O14828 347 aaKnown RBP23.38■■□□□ 1.33
LSM6-203ENST00000503982 AKAP3O75969 853 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 CCDC130P13994 396 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 TCF3P15923 654 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 CNR2P34972 360 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 PSMC2P35998 433 aaKnown RBP23.38■■□□□ 1.33
LSM6-203ENST00000503982 SLC5A3P53794 718 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 FBXO43Q4G163 708 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 FILIP1Q7Z7B0 1213 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 SLC2A14Q8TDB8 520 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 TMEM174Q8WUU8 243 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 RMDN1Q96DB5 314 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 DNAI2Q9GZS0 605 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 FBRSL1Q9HCM7 1045 aaKnown RBP23.38■■□□□ 1.33
LSM6-203ENST00000503982 CFAP97Q9P2B7 532 aa23.38■■□□□ 1.33
LSM6-203ENST00000503982 MAPK13O15264 365 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 HRO43593 1189 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 ASS1P00966 412 aaKnown RBP23.37■■□□□ 1.33
LSM6-203ENST00000503982 CD58P19256 250 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 ADORA2BP29275 332 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 MAP3K7CLP57077 242 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 SLC7A9P82251 487 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 PNOCQ13519 176 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 CLEC17AQ6ZS10 378 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 WDR5BQ86VZ2 330 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 UNC93AQ86WB7 457 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 DDX42Q86XP3 938 aaKnown RBP eCLIP23.37■■□□□ 1.33
LSM6-203ENST00000503982 SMYD4Q8IYR2 804 aaPredicted RBP23.37■■□□□ 1.33
LSM6-203ENST00000503982 RPLP0P6Q8NHW5 317 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 SCAMP5Q8TAC9 235 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 JAKMIP2Q96AA8 810 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 RMND1Q9NWS8 449 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 HMGXB4Q9UGU5 601 aa23.37■■□□□ 1.33
LSM6-203ENST00000503982 MYOFQ9NZM1 2061 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 SLC9A3R1O14745 358 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms