RNA–Protein interactions for RNA: ENST00000503799.5

CLDND1-210, Transcript of claudin domain containing 1, humanhuman

TSL 5

Gene CLDND1, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-210ENST00000503799 USP43Q70EL4 1123 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 PARS2Q7L3T8 475 aaKnown RBP3.07□□□□□ -1.92
CLDND1-210ENST00000503799 PPP1R32Q7Z5V6 425 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 SRGAP1Q7Z6B7 1085 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 PRR18Q8N4B5 295 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 C3orf20Q8ND61 904 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 CUL5Q93034 780 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 TTC17Q96AE7 1141 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 MVB12AQ96EY5 273 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 CDK5RAP3Q96JB5 506 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 SIK2Q9H0K1 926 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 WDCPQ9H6R7 721 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 FAM204AQ9H8W3 233 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 G3BP2Q9UN86 482 aaKnown RBP3.07□□□□□ -1.92
CLDND1-210ENST00000503799 ZCCHC6Q5VYS8 1495 aaKnown RBP3.07□□□□□ -1.92
CLDND1-210ENST00000503799 SYNJ1O43426 1573 aa3.07□□□□□ -1.92
CLDND1-210ENST00000503799 CCDC154A6NI56 674 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 PRSS29PA6NIE9 313 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 ERVV-2B6SEH9 535 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 NT5C1B-RDH14C9J2C7 533 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 FAM227AF5H4B4 570 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 UBE2Q2LH0YL09 131 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 H3BML4 177 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 DSCR3O14972 297 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 MALP21145 153 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 EDNRBP24530 442 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 MT3P25713 68 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 KCNJ5P48544 419 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 SP2Q02086 613 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 SNAPC2Q13487 334 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 ZNF268Q14587 947 aaPredicted RBP3.06□□□□□ -1.92
CLDND1-210ENST00000503799 ODF1Q14990 250 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 MLC1Q15049 377 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 ABCC10Q5T3U5 1492 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 MEX3CQ5U5Q3 659 aaKnown RBP3.06□□□□□ -1.92
CLDND1-210ENST00000503799 CCSAPQ6IQ19 270 aaPredicted RBP3.06□□□□□ -1.92
CLDND1-210ENST00000503799 SLC4A10Q6U841 1118 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 ZNF813Q6ZN06 617 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 Q6ZWC4 215 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 DENND1CQ8IV53 801 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 FMNL3Q8IVF7 1028 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 TERB1Q8NA31 727 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 NSUN6Q8TEA1 469 aaKnown RBP3.06□□□□□ -1.92
CLDND1-210ENST00000503799 KAT5Q92993 513 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 HPS3Q969F9 1004 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 CTAGE1Q96RT6 745 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 VRK1Q99986 396 aaPredicted RBP3.06□□□□□ -1.92
CLDND1-210ENST00000503799 RTFDC1Q9BY42 306 aaPredicted RBP3.06□□□□□ -1.92
CLDND1-210ENST00000503799 HIPK2Q9H2X6 1198 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 SLAMF7Q9NQ25 335 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 CHPF2Q9P2E5 772 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 FEZ2Q9UHY8 353 aaPredicted RBP3.06□□□□□ -1.92
CLDND1-210ENST00000503799 LIMCH1Q9UPQ0 1083 aa3.06□□□□□ -1.92
CLDND1-210ENST00000503799 TOP2BQ02880 1626 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 DIP2BQ9P265 1576 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 AQRO60306 1485 aaKnown RBP eCLIP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 PRSS44E7EML9 344 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 GTPBP1O00178 669 aaKnown RBP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 SMAD6O43541 496 aaKnown RBP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 KRT86O43790 486 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 EXOC3O60645 756 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 TJP3O95049 919 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 PDE8BO95263 885 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 TOMM40O96008 361 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 RARBP10826 455 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 HOXD9P28356 352 aaPredicted RBP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 SMARCA1P28370 1054 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 CACNB3P54284 484 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 GPSM2P81274 684 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 BOP1Q14137 746 aaKnown RBP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 KRT81Q14533 505 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 KIF22Q14807 665 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 KHDC1Q4VXA5 237 aaKnown RBP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 SERPINA13PQ6UXR4 307 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 C11orf96Q7Z7L8 435 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 DIS3LQ8TF46 1054 aaKnown RBP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 DDX17Q92841 729 aaKnown RBP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 SNX18Q96RF0 628 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 THAP7Q9BT49 309 aaPredicted RBP3.05□□□□□ -1.92
CLDND1-210ENST00000503799 EFHD1Q9BUP0 239 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 SLC12A5Q9H2X9 1139 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 GLOD4Q9HC38 313 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 CNNM1Q9NRU3 951 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 SERTAD3Q9UJW9 196 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 STXBP5LQ9Y2K9 1186 aa3.05□□□□□ -1.92
CLDND1-210ENST00000503799 PEG3Q9GZU2 1588 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 H3BNX3 289 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 M0QYG6 137 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 CAND2O75155 1236 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 PARNO95453 639 aaKnown RBP3.04□□□□□ -1.92
CLDND1-210ENST00000503799 FTLP02792 175 aaPredicted RBP3.04□□□□□ -1.92
CLDND1-210ENST00000503799 HRGP04196 525 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 RPL17P18621 184 aaKnown RBP3.04□□□□□ -1.92
CLDND1-210ENST00000503799 ATF3P18847 181 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 PHKA1P46020 1223 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 PIK3CGP48736 1102 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 RENBPP51606 427 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 HK3P52790 923 aa3.04□□□□□ -1.92
CLDND1-210ENST00000503799 TPTEP56180 551 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms