RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 STEAP4Q687X5 459 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 PHLDB2Q86SQ0 1253 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 TRIM42Q8IWZ5 723 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 KIF2BQ8N4N8 673 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 PRPF31Q8WWY3 499 aaKnown RBP7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 SPOCK2Q92563 424 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 MTBPQ96DY7 904 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 FGD4Q96M96 766 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 GPR20Q99678 358 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 ASB7Q9H672 318 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 ARHGEF4Q9NR80 690 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 KLHL11Q9NVR0 708 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 ASNSD1Q9NWL6 643 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 SIRPGQ9P1W8 387 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 PAK5Q9P286 719 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 L3MBTL1Q9Y468 752 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 COL1A2P08123 1366 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 FAM170AA1A519 330 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 MDM4O15151 490 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 BIRC5O15392 142 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 CST8O60676 142 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 ATP6V1C1P21283 382 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 TFDP2Q14188 446 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 LBRQ14739 615 aaKnown RBP7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 AMHR2Q16671 573 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 TEX44Q53QW1 395 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 UNC45BQ8IWX7 931 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 PDIK1LQ8N165 341 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 PEBP4Q96S96 227 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 CPXM1Q96SM3 734 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 MIPEPQ99797 713 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 CNPY3Q9BT09 278 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 STN1Q9H668 368 aaKnown RBP7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 MANSC1Q9H8J5 431 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 POPDC2Q9HBU9 364 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 GBA2Q9HCG7 927 aaPredicted RBP7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 KCNK4Q9NYG8 393 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 DNAJB4Q9UDY4 337 aa7.54□□□□□ -1.2
LYSMD3-203ENST00000500869 DNAJC25-GNG10A0A024R161 153 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 TCRBV7S3A2A0A539 114 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 CAPN14A8MX76 684 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 POC1B-GALNT4F8VUJ3 575 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 MCF2LO15068 1137 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 MAGEC1O60732 1142 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 SNNO75324 88 aaPredicted RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 ZNF189O75820 626 aaPredicted RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 ADRA1DP25100 572 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 PPARDQ03181 441 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 PTPN11Q06124 597 aaPredicted RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 NAB1Q13506 487 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 EFTUD2Q15029 972 aaKnown RBP eCLIP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 TTC39BQ5VTQ0 682 aaPredicted RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 LCLAT1Q6UWP7 414 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 C4orf50Q6ZRC1 276 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 FAM47EQ6ZV65 393 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 C4orf33Q8N1A6 199 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 TCP10LQ8TDR4 215 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 BTBD10Q9BSF8 475 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 DCLRE1BQ9H816 532 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 XPO7Q9UIA9 1087 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 ZFP69BQ9UJL9 534 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 TCRBV9S1A1TA0A576 114 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 A8MXQ7 604 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 CCDC22O60826 627 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 MICAL2O94851 1124 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 MARK3P27448 753 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 MIPP30301 263 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 CLNS1AP54105 237 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 HMGCS2P54868 508 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 EIF3EP60228 445 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 YWHAZP63104 245 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 OCRLQ01968 901 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 ROR1Q01973 937 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 TNFAIP2Q03169 654 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 FRG1Q14331 258 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 KAZNQ674X7 775 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 SLC26A11Q86WA9 606 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 ZNF670Q9BS34 389 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 TRIM55Q9BYV6 548 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 ELOVL4Q9GZR5 314 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 CDT1Q9H211 546 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 NKX1-2Q9UD57 310 aaPredicted RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 SORCS3Q9UPU3 1222 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 DERAQ9Y315 318 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 FAM159BA6NKW6 160 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 F8W8V4 182 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 CNMDO75829 334 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 CNTFP26441 200 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 TARSP26639 723 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 SSTR1P30872 391 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 PSMC1P62191 440 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 ZNF200P98182 395 aaPredicted RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 GAD2Q05329 585 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 TAF1BQ53T94 588 aaPredicted RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 CELF3Q5SZQ8 465 aaKnown RBP7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 ATF7IP2Q5U623 682 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 C3orf62Q6ZUJ4 267 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 RHPN2Q8IUC4 686 aa7.53□□□□□ -1.2
LYSMD3-203ENST00000500869 IGDCC3Q8IVU1 814 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms