RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 PLA2G6O60733 806 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 ATP6V1B1P15313 513 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 FGFR4P22455 802 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 PPM1AP35813 382 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 PMS2P54278 862 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 HADHBP55084 474 aaKnown RBP9.39□□□□□ -0.91
FN1-227ENST00000498719 PTPRNQ16849 979 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 XKR9Q5GH70 373 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 AGBL2Q5U5Z8 902 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 C11orf63Q6NUN7 778 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 KCNV1Q6PIU1 500 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 SAPCD2Q86UD0 394 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 UBL4BQ8N7F7 174 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 ZNF564Q8TBZ8 553 aaPredicted RBP9.39□□□□□ -0.91
FN1-227ENST00000498719 NEK9Q8TD19 979 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 TAS1R2Q8TE23 839 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 BSNDQ8WZ55 320 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 WNK4Q96J92 1243 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 ACO2Q99798 780 aaKnown RBP9.39□□□□□ -0.91
FN1-227ENST00000498719 PI4K2AQ9BTU6 479 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 TRIM7Q9C029 511 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 FANCFQ9NPI8 374 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 ARHGEF4Q9NR80 690 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 WDR35Q9P2L0 1181 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 DBR1Q9UK59 544 aaKnown RBP9.39□□□□□ -0.91
FN1-227ENST00000498719 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 SYNGAP1Q96PV0 1343 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 SPOPO43791 374 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 GRIN3BO60391 1043 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 HSPA4LO95757 839 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 POU3F2P20265 443 aaPredicted RBP9.39□□□□□ -0.91
FN1-227ENST00000498719 SLCO1A2P46721 670 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 IFI35P80217 286 aaPredicted RBP9.39□□□□□ -0.91
FN1-227ENST00000498719 DHX34Q14147 1143 aaKnown RBP9.39□□□□□ -0.91
FN1-227ENST00000498719 TNIP1Q15025 636 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 PGM5Q15124 567 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 DAB2IPQ5VWQ8 1189 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 ANO5Q75V66 913 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 ZBTB34Q8NCN2 500 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 CD101Q93033 1021 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 ZNF653Q96CK0 615 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 RIPOR3Q96MK2 946 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 NT5C1BQ96P26 610 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 PABPC3Q9H361 631 aaKnown RBP9.39□□□□□ -0.91
FN1-227ENST00000498719 C1orf112Q9NSG2 853 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 PCDHB10Q9UN67 800 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 PCDHA3Q9Y5H8 950 aa9.39□□□□□ -0.91
FN1-227ENST00000498719 DENND3A2RUS2 1198 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 MIF4GDA9UHW6 222 aaKnown RBP9.38□□□□□ -0.91
FN1-227ENST00000498719 WNT10BO00744 389 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 EGFRP00533 1210 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 ASNSP08243 561 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 RARAP10276 462 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 DLATP10515 647 aaKnown RBP9.38□□□□□ -0.91
FN1-227ENST00000498719 CYP11B1P15538 503 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 CTNNA2P26232 953 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 FNTAP49354 379 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 NCKAP1LP55160 1127 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 SP4Q02446 784 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 TMED1Q13445 227 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 PROX2Q3B8N5 592 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 TRIM68Q6AZZ1 485 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 SLC39A4Q6P5W5 647 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 VSIG1Q86XK7 387 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 C12orf56Q8IXR9 622 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 CCDC105Q8IYK2 499 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 OR2C3Q8N628 320 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 ANKRD52Q8NB46 1076 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 TMEM161BQ8NDZ6 487 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 ZSCAN18Q8TBC5 510 aaPredicted RBP9.38□□□□□ -0.91
FN1-227ENST00000498719 SHC3Q92529 594 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 TLCD1Q96CP7 247 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 DEFB129Q9H1M3 183 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 SUDS3Q9H7L9 328 aaPredicted RBP9.38□□□□□ -0.91
FN1-227ENST00000498719 TBX20Q9UMR3 447 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 PCDHGB5Q9Y5G0 923 aa9.38□□□□□ -0.91
FN1-227ENST00000498719 PFASO15067 1338 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 ADGRA3Q8IWK6 1321 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 FAM187AA6NFU0 413 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 CLDN3O15551 220 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 TGDSO95455 350 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 MT-ND3P03897 115 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 JMJD7P0C870 316 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 MAPTP10636 758 aaKnown RBP9.37□□□□□ -0.91
FN1-227ENST00000498719 CHRNA3P32297 505 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 PRIM2P49643 509 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 RAB15P59190 212 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 SATB1Q01826 763 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 BYSLQ13895 437 aaKnown RBP9.37□□□□□ -0.91
FN1-227ENST00000498719 SIX1Q15475 284 aaPredicted RBP9.37□□□□□ -0.91
FN1-227ENST00000498719 CCDC38Q502W7 563 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 TMEM240Q5SV17 173 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 SEL1L2Q5TEA6 688 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 DENND2CQ68D51 928 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 C6orf89Q6UWU4 347 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 CCDC25Q86WR0 208 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 TREML1Q86YW5 311 aa9.37□□□□□ -0.91
FN1-227ENST00000498719 SUPT20HQ8NEM7 779 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms