RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SMARCD2Q92925 531 aa6.07□□□□□ -1.44
SPTA1-209ENST00000498708 ZFYVE19Q96K21 471 aa6.07□□□□□ -1.44
SPTA1-209ENST00000498708 LRRC3BQ96PB8 259 aa6.07□□□□□ -1.44
SPTA1-209ENST00000498708 CORO1BQ9BR76 489 aa6.07□□□□□ -1.44
SPTA1-209ENST00000498708 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
SPTA1-209ENST00000498708 TMEM74BQ9NUR3 256 aa6.07□□□□□ -1.44
SPTA1-209ENST00000498708 GTSE1Q9NYZ3 720 aa6.07□□□□□ -1.44
SPTA1-209ENST00000498708 ORC3Q9UBD5 711 aaPredicted RBP6.07□□□□□ -1.44
SPTA1-209ENST00000498708 ADAM28Q9UKQ2 775 aa6.07□□□□□ -1.44
SPTA1-209ENST00000498708 GIT1Q9Y2X7 761 aa6.07□□□□□ -1.44
SPTA1-209ENST00000498708 FLNCQ14315 2725 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 MUC22E2RYF6 1773 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 PTPRDP23468 1912 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 TRABD2BA6NFA1 517 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 I3L4J1 428 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 TBX3O15119 743 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 SH3BP5O60239 455 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 CDKL5O76039 1030 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 CTDNEP1O95476 244 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 NTRK1P04629 796 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 FTH1P19P0C7X4 201 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 CD59P13987 128 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 GCFC2P16383 781 aaKnown RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 PTPN2P17706 415 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 OR1D2P34982 312 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 KRT2P35908 639 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 ARL2P36404 184 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 DHPSP49366 369 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 RARRES1P49788 294 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 ARPP19P56211 112 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 GUCY1B3Q02153 619 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 CREMQ03060 361 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 TNK2Q07912 1038 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 SPIRE1Q08AE8 756 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 LMAN2Q12907 356 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 GRIK3Q13003 919 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 RAB33AQ14088 237 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 MXD4Q14582 209 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 TRIP6Q15654 476 aaKnown RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 PSMD5Q16401 504 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 CALCRLQ16602 461 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 GLRA4Q5JXX5 417 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 EEF1DP3Q658K8 133 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 ACAD11Q709F0 780 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 NOSTRINQ8IVI9 506 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 SLFN12Q8IYM2 578 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 AGGF1Q8N302 714 aaeCLIP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 CEP120Q8N960 986 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 TTC16Q8NEE8 873 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 ZSCAN18Q8TBC5 510 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 DEPDC1BQ8WUY9 529 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 CCDC97Q96F63 343 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 MSANTD3Q96H12 275 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 NAP1L5Q96NT1 182 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 NAP1L4Q99733 375 aaKnown RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 SEMA4CQ9C0C4 833 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 RASSF4Q9H2L5 321 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 TTC12Q9H892 705 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 TRPV4Q9HBA0 871 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 KCNK4Q9NYG8 393 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 EVLQ9UI08 416 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-209ENST00000498708 TPCN1Q9ULQ1 816 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 PCDHA12Q9UN75 941 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 GDAQ9Y2T3 454 aa6.06□□□□□ -1.44
SPTA1-209ENST00000498708 HELZP42694 1942 aaKnown RBP6.05□□□□□ -1.44
SPTA1-209ENST00000498708 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
SPTA1-209ENST00000498708 BTBD18B2RXH4 712 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 PTGESO14684 152 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 CAPN9O14815 690 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 CHADO15335 359 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 NEMFO60524 1076 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 PFKFB2O60825 505 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 MED24O75448 989 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 LARGE1O95461 756 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 EGFP01133 1207 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 EDN1P05305 212 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 PRKCBP05771 671 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 THP07101 528 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 KRT10P13645 584 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 FDPSP14324 419 aaKnown RBP6.05□□□□□ -1.44
SPTA1-209ENST00000498708 BRCC3P46736 316 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 DGKEP52429 567 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 OSTNP61366 133 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 FCHO2Q0JRZ9 810 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 TUSC3Q13454 348 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 KARSQ15046 597 aaKnown RBP6.05□□□□□ -1.44
SPTA1-209ENST00000498708 DUOXA2Q1HG44 320 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 FSTL4Q6MZW2 842 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 C1orf228Q6PIY5 440 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 TOGARAM2Q6ZUX3 1019 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 ARMCX6Q7L4S7 300 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 ZNF438Q7Z4V0 828 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 ZBTB8OSQ8IWT0 167 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 YAF2Q8IY57 180 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 HDDC3Q8N4P3 179 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 BSNDQ8WZ55 320 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 CHFRQ96EP1 664 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 CCDC51Q96ER9 411 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 FCRL3Q96P31 734 aaPredicted RBP6.05□□□□□ -1.44
SPTA1-209ENST00000498708 HSD17B14Q9BPX1 270 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms