RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 RASA2Q15283 850 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 RCN1Q15293 331 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 OASLQ15646 514 aaKnown RBP17.14■□□□□ 0.33
COL6A1-206ENST00000498614 HSDL1Q3SXM5 330 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 SPOCD1Q6ZMY3 1216 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 ZNF398Q8TD17 642 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 TCP10LQ8TDR4 215 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 UCMAQ8WVF2 138 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 TRAPPC12Q8WVT3 735 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 NRG4Q8WWG1 115 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 PTPRN2Q92932 1015 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 FAM136AQ96C01 138 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 ASCC2Q9H1I8 757 aaPredicted RBP17.14■□□□□ 0.33
COL6A1-206ENST00000498614 HEY2Q9UBP5 337 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 CPSF3Q9UKF6 684 aaKnown RBP17.14■□□□□ 0.33
COL6A1-206ENST00000498614 ABLIM1O14639 778 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 KRT36O76013 467 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 FESP07332 822 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 SGSM1Q2NKQ1 1148 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 ZNF699Q32M78 642 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 MSS51Q4VC12 460 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 IER5Q5VY09 327 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 RHPN2Q8IUC4 686 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 ZBTB8OSQ8IWT0 167 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 TMEM130Q8N3G9 435 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 CEP120Q8N960 986 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 MS4A4AQ96JQ5 239 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 SH3GL3Q99963 347 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 BTBD10Q9BSF8 475 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 SSU72Q9NP77 194 aaKnown RBP17.14■□□□□ 0.33
COL6A1-206ENST00000498614 STOML1Q9UBI4 398 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 SHOC2Q9UQ13 582 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 SGK1O00141 431 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 GSC2O15499 205 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 CCDC22O60826 627 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 NPTXRO95502 500 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 LSM8O95777 96 aaKnown RBP17.13■□□□□ 0.33
COL6A1-206ENST00000498614 PGK2P07205 417 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 PSMC4P43686 418 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 ZNF157P51786 506 aaPredicted RBP17.13■□□□□ 0.33
COL6A1-206ENST00000498614 FKBP1BP68106 108 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 KPNB1Q14974 876 aaKnown RBP17.13■□□□□ 0.33
COL6A1-206ENST00000498614 SEPT7Q16181 437 aaKnown RBP17.13■□□□□ 0.33
COL6A1-206ENST00000498614 CCDC6Q16204 474 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 ACSBG2Q5FVE4 666 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 SAPCD2Q86UD0 394 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 MZB1Q8WU39 189 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 C10orf88Q9H8K7 445 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 NXF1Q9UBU9 619 aaKnown RBP17.13■□□□□ 0.33
COL6A1-206ENST00000498614 POLIQ9UNA4 740 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 DRG1Q9Y295 367 aaKnown RBP17.13■□□□□ 0.33
COL6A1-206ENST00000498614 AHCYL1O43865 530 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 HNRNPCL1O60812 293 aaKnown RBP17.13■□□□□ 0.33
COL6A1-206ENST00000498614 HAUS5O94927 633 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 HOXC6P09630 235 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 SP100P23497 879 aaPredicted RBP17.13■□□□□ 0.33
COL6A1-206ENST00000498614 VHLP40337 213 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 RAP1GAPP47736 663 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 MCL1Q07820 350 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 MTM1Q13496 603 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 HIF1AQ16665 826 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 TMEM132AQ24JP5 1023 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 FNBP1LQ5T0N5 605 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 SNX30Q5VWJ9 437 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 ANKRD22Q5VYY1 191 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 LRRC6Q86X45 466 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 NLRP4Q96MN2 994 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 TSC22D3Q99576 134 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 WDR83Q9BRX9 315 aaKnown RBP17.13■□□□□ 0.33
COL6A1-206ENST00000498614 PPCSQ9HAB8 311 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 PIDD1Q9HB75 910 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 TJP2Q9UDY2 1190 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 AGTPBP1Q9UPW5 1226 aa17.13■□□□□ 0.33
COL6A1-206ENST00000498614 MGAMO43451 1857 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 hCG_1818297A0A087WSY0 165 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 CCL15-CCL14A0A0B4J2E2 113 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 ZBTB42B2RXF5 422 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 B4GALT5O43286 388 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 SMIM24O75264 130 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 NEFHP12036 1026 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 ASPAP45381 313 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 PLCB3Q01970 1234 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 CCL15Q16663 113 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 PPP1R15BQ5SWA1 713 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 DENND1BQ6P3S1 775 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 TEKT4Q8WW24 435 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 FAM167AQ96KS9 214 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 PAFAH2Q99487 392 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 MANSC1Q9H8J5 431 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 FBXO6Q9NRD1 293 aaPredicted RBP17.12■□□□□ 0.33
COL6A1-206ENST00000498614 METTL5Q9NRN9 209 aaKnown RBP17.12■□□□□ 0.33
COL6A1-206ENST00000498614 DLGAP2Q9P1A6 1054 aa17.12■□□□□ 0.33
COL6A1-206ENST00000498614 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
COL6A1-206ENST00000498614 KRT19P08727 400 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 CD19P15391 556 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 SARNPP82979 210 aaKnown RBP17.11■□□□□ 0.33
COL6A1-206ENST00000498614 ORC1Q13415 861 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 SMTNL2Q2TAL5 461 aa17.11■□□□□ 0.33
COL6A1-206ENST00000498614 SPRYD7Q5W111 196 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms