RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CLDND1Q9NY35 253 aa14.96□□□□□ -0.01
VPS26A-209ENST00000497564 SPG21Q9NZD8 308 aa14.96□□□□□ -0.01
VPS26A-209ENST00000497564 MTCL1Q9Y4B5 1905 aaKnown RBP14.96□□□□□ -0.02
VPS26A-209ENST00000497564 OR6C75A6NL08 312 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 HIDE1A8MVS5 230 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 FSCN2O14926 492 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 XPO1O14980 1071 aaKnown RBP14.95□□□□□ -0.02
VPS26A-209ENST00000497564 PER2O15055 1255 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 TBX10O75333 385 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 PALMO75781 387 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 FAM200BP0CF97 657 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 NPR3P17342 541 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 ADORA2BP29275 332 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 NRIP1P48552 1158 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 MAMLD1Q13495 774 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 CLUL1Q15846 466 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 PPP1R15BQ5SWA1 713 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 PLPP4Q5VZY2 271 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 ZNF280DQ6N043 979 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 TMEM110Q86TL2 294 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 FAM35AQ86V20 835 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 XYLT1Q86Y38 959 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.95□□□□□ -0.02
VPS26A-209ENST00000497564 MICAL1Q8TDZ2 1067 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 IPO4Q8TEX9 1081 aaKnown RBP14.95□□□□□ -0.02
VPS26A-209ENST00000497564 MCRS1Q96EZ8 462 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 PCED1BQ96HM7 432 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 VN1R3Q9BXE9 311 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 UBXN6Q9BZV1 441 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 ZCWPW1Q9H0M4 648 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 ABCB6Q9NP58 842 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 LCMT1Q9UIC8 334 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 TRIOO75962 3097 aa14.95□□□□□ -0.02
VPS26A-209ENST00000497564 H7C4K7 107 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 TBC1D4O60343 1298 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 BUB1BO60566 1050 aaPredicted RBP14.94□□□□□ -0.02
VPS26A-209ENST00000497564 GLP2RO95838 553 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 ERBB2P04626 1255 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 SCNN1AP37088 669 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 ACADSBP45954 432 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 SLC8A3P57103 927 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 UBE3AQ05086 875 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 CCDC142Q17RM4 750 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 AAK1Q2M2I8 961 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 USP41Q3LFD5 358 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 MEI1Q5TIA1 1274 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 PAPD7Q5XG87 772 aaKnown RBP14.94□□□□□ -0.02
VPS26A-209ENST00000497564 PMF1Q6P1K2 205 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 DNAJC24Q6P3W2 148 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 C4orf50Q6ZRC1 276 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 CLEC20AQ6ZU45 233 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 ZDHHC17Q8IUH5 632 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 DCP1BQ8IZD4 617 aaKnown RBP14.94□□□□□ -0.02
VPS26A-209ENST00000497564 VN1R2Q8NFZ6 395 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 AUTS2Q8WXX7 1259 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 KCTD13Q8WZ19 329 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 ZNF592Q92610 1267 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 MYLPFQ96A32 169 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 SMARCD1Q96GM5 515 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 MED10Q9BTT4 135 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 CSNK1G1Q9HCP0 422 aa14.94□□□□□ -0.02
VPS26A-209ENST00000497564 FAM170AA1A519 330 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 SIGLEC16A6NMB1 481 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 E5RJQ4 531 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 TULP2O00295 520 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 CLDN5O00501 218 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 IL9P15248 144 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 PPM1AP35813 382 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 AMPD2Q01433 879 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 ADAM15Q13444 863 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 TUBB2AQ13885 445 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 NFE2Q16621 373 aaPredicted RBP14.93□□□□□ -0.02
VPS26A-209ENST00000497564 LEXMQ3ZCV2 418 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 C2CD6Q53TS8 623 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 CYP4A22Q5TCH4 519 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 ANKS3Q6ZW76 656 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 LRRTM3Q86VH5 581 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 GPR65Q8IYL9 337 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 FEZF2Q8TBJ5 459 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 FUBP3Q96I24 572 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS26A-209ENST00000497564 UHRF1Q96T88 793 aaPredicted RBP14.93□□□□□ -0.02
VPS26A-209ENST00000497564 TCF25Q9BQ70 676 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 TTPALQ9BTX7 342 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 TUBB2BQ9BVA1 445 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 HERC2P3Q9BVR0 1158 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 SYNCQ9H7C4 482 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 CHST7Q9NS84 486 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 KRT82Q9NSB4 513 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 TJP2Q9UDY2 1190 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 STK39Q9UEW8 545 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 ANAPC7Q9UJX3 599 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 LZTS1Q9Y250 596 aa14.93□□□□□ -0.02
VPS26A-209ENST00000497564 TMEM191CA6NGB0 347 aa14.92□□□□□ -0.02
VPS26A-209ENST00000497564 AP1G2O75843 785 aa14.92□□□□□ -0.02
VPS26A-209ENST00000497564 SOD2P04179 222 aa14.92□□□□□ -0.02
VPS26A-209ENST00000497564 ATP1A1P05023 1023 aaKnown RBP14.92□□□□□ -0.02
VPS26A-209ENST00000497564 PRLRP16471 622 aa14.92□□□□□ -0.02
VPS26A-209ENST00000497564 MAN1A1P33908 653 aa14.92□□□□□ -0.02
VPS26A-209ENST00000497564 SMARCB1Q12824 385 aa14.92□□□□□ -0.02
VPS26A-209ENST00000497564 CFAP221Q4G0U5 840 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms