RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 TRIP12Q14669 1992 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-208ENST00000497026 WDR81Q562E7 1941 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 DNAH12Q6ZR08 3092 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 UMODL1Q5DID0 1318 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 MROH7Q68CQ1 1323 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 CCDC196A0A1B0GTZ2 297 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 ESYT2A0FGR8 921 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 SMCO2A6NFE2 343 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 PRAMEF25A6NGN4 478 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 ERICH4A6NGS2 130 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 KIAA0355O15063 1070 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 FIBPO43427 364 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 EDIL3O43854 480 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 ZEB2O60315 1214 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 STAM2O75886 525 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 GGPS1O95749 300 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 MYL3P08590 195 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 MC4RP32245 332 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 ADCY7P51828 1080 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 EPHB4P54760 987 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 AK2P54819 239 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 NAPAP54920 295 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 NCBP1Q09161 790 aaKnown RBP5.47□□□□□ -1.53
CSMD3-208ENST00000497026 STK3Q13188 491 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 ITGA7Q13683 1181 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 NPY5RQ15761 445 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 CRY1Q16526 586 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 CELF3Q5SZQ8 465 aaKnown RBP5.47□□□□□ -1.53
CSMD3-208ENST00000497026 ICE2Q659A1 982 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 C16orf59Q7L2K0 433 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 PALM2Q8IXS6 379 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 CCDC112Q8NEF3 446 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 MNS1Q8NEH6 495 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 PPTC7Q8NI37 304 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 KIF18AQ8NI77 898 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 CRYGNQ8WXF5 182 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 BADQ92934 168 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 CUL5Q93034 780 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 AIFM3Q96NN9 605 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 CTAGE1Q96RT6 745 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 SLC26A6Q9BXS9 759 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 ANO3Q9BYT9 981 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 ZMYND12Q9H0C1 365 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 ALDH8A1Q9H2A2 487 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-208ENST00000497026 SMURF1Q9HCE7 757 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 RIC8AQ9NPQ8 531 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 PDRG1Q9NUG6 133 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 TMEM260Q9NX78 707 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 USP25Q9UHP3 1055 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 MYRFQ9Y2G1 1151 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 COQ6Q9Y2Z9 468 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 UBIAD1Q9Y5Z9 338 aa5.47□□□□□ -1.53
CSMD3-208ENST00000497026 SIP14410 1827 aa5.46□□□□□ -1.53
CSMD3-208ENST00000497026 SZT2Q5T011 3432 aa5.46□□□□□ -1.53
CSMD3-208ENST00000497026 PTPRSQ13332 1948 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 A0A1W2PPC1 479 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 ZNF561-AS1K7EIQ3 104 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 HAS3O00219 553 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 WNT9AO14904 365 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 KIF1CO43896 1103 aaKnown RBP5.46□□□□□ -1.54
CSMD3-208ENST00000497026 ATP9AO75110 1047 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 CTDNEP1O95476 244 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 CNOT4O95628 575 aaKnown RBP5.46□□□□□ -1.54
CSMD3-208ENST00000497026 F2P00734 622 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 ZNF286BP0CG31 522 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 TGFB3P10600 412 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 KCNA2P16389 499 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 SREBF1P36956 1147 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 ADCY8P40145 1251 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 RRADP55042 308 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 ME3Q16798 604 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 C9orf50Q5SZB4 431 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 FSTL4Q6MZW2 842 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 KCNV1Q6PIU1 500 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 METTL7BQ6UX53 244 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 SPRED1Q7Z699 444 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 CCDC91Q7Z6B0 441 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 TDHQ8IZJ6 230 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 NLGN4XQ8N0W4 816 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 TTC9BQ8N6N2 239 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 CYP2W1Q8TAV3 490 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 SLC7A14Q8TBB6 771 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 DVL3Q92997 716 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-208ENST00000497026 KISS1RQ969F8 398 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-208ENST00000497026 C16orf70Q9BSU1 422 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 MTG1Q9BT17 334 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-208ENST00000497026 TRPV6Q9H1D0 765 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 MEGF9Q9H1U4 602 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 TRMT13Q9NUP7 481 aaKnown RBP5.46□□□□□ -1.54
CSMD3-208ENST00000497026 VPS54Q9P1Q0 977 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 GBF1Q92538 1859 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 CDH23Q9H251 3354 aa5.46□□□□□ -1.54
CSMD3-208ENST00000497026 TET1Q8NFU7 2136 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 STK36Q9NRP7 1315 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 IGLV3-22A0A075B6J6 115 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-208ENST00000497026 FAM86B1E9PN63 330 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 SCDO00767 359 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 MATN3O15232 486 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 KPNA6O60684 536 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms