RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 NOX5Q96PH1 765 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ACO2Q99798 780 aaKnown RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 OXCT2Q9BYC2 517 aaPredicted RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ABHD16BQ9H3Z7 469 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ANKZF1Q9H8Y5 726 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 TMEM8AQ9HCN3 771 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 BZW2Q9Y6E2 419 aaKnown RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 XIRP2A4UGR9 3374 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ADGRA2Q96PE1 1338 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 CNTNAP2Q9UHC6 1331 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ZSCAN5CA6NGD5 496 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 EFCAB8A8MWE9 144 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 ABLIM1O14639 778 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 HBP1O60381 514 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 AOC2O75106 756 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TACC1O75410 805 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TOM1L1O75674 476 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 GJB6O95452 261 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 PGK1P00558 417 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 HLA-DRAP01903 254 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 C4BPAP04003 597 aaKnown RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 MMP3P08254 477 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 KRT19P08727 400 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CYP11B1P15538 503 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CHRNB2P17787 502 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TNFAIP3P21580 790 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 GARTP22102 1010 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 PRKCIP41743 596 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 POLD2P49005 469 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 MYL6P60660 151 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 FKBP1BP68106 108 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 ZNF568Q3ZCX4 644 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 ZACNQ401N2 412 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 DUSP28Q4G0W2 176 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 IER5Q5VY09 327 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 PAPD7Q5XG87 772 aaKnown RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TMEM270Q6UE05 265 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 SND1Q7KZF4 910 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 ARL6IP6Q8N6S5 226 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TRIM58Q8NG06 486 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 PPTC7Q8NI37 304 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 SLC35G2Q8TBE7 412 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CAGE1Q8TC20 777 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 OSBPL9Q96SU4 736 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 SYT11Q9BT88 431 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 PCSK1NQ9UHG2 260 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 SNX12Q9UMY4 172 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 GABRQQ9UN88 632 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CARD8Q9Y2G2 431 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 MYH9P35579 1960 aaKnown RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 MYH10P35580 1976 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TRIOBPQ9H2D6 2365 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CTAGE15A4D2H0 777 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 NDUFAB1O14561 156 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TNPO2O14787 897 aaKnown RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 RASA4O43374 803 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 PHACTR2O75167 634 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 RPS6KA5O75582 802 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TUBB4AP04350 444 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 H2AFZP0C0S5 128 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CTAGE8P0CG41 777 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 PRLRP16471 622 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 FERP16591 822 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 ZFXP17010 805 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 ARF4P18085 180 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 OAS2P29728 719 aaKnown RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CDH8P55286 799 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 SLC8A3P57103 927 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 BPIFB3P59826 476 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 MBTD1Q05BQ5 628 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 PPFIA1Q13136 1202 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TCEAL1Q15170 157 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TAF11Q15544 211 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TRADDQ15628 312 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 GRIK4Q16099 956 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CRY1Q16526 586 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 ATF7IP2Q5U623 682 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 NAA35Q5VZE5 725 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CAPN12Q6ZSI9 719 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 H2AFVQ71UI9 128 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 DAAM2Q86T65 1068 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TLK2Q86UE8 772 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CTAGE6Q86UF2 777 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CTAGE4Q8IX94 777 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 DEFB123Q8N688 67 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 RHBDD1Q8TEB9 315 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 TMEM40Q8WWA1 233 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 IQCDQ96DY2 449 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 ZNF837Q96EG3 531 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CABS1Q96KC9 395 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 NT5C1BQ96P26 610 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 NELL2Q99435 816 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 OSMRQ99650 979 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 AGPAT1Q99943 283 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 MRPL4Q9BYD3 311 aaKnown RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 CCDC113Q9H0I3 377 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 ARGLU1Q9NWB6 273 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-213ENST00000496622 STYXL1Q9Y6J8 313 aa6.49□□□□□ -1.37
SSBP1-213ENST00000496622 FAM155AB1AL88 458 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms