RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CCDC173Q0VFZ6 552 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 NAA35Q5VZE5 725 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 EP400NLQ6ZTU2 488 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 SLC30A5Q8TAD4 765 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 OLIG1Q8TAK6 271 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 BAG1Q99933 345 aaPredicted RBP22.94■■□□□ 1.26
C9orf3-222ENST00000496567 FBXO44Q9H4M3 255 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 CYTH4Q9UIA0 394 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 DDX3XO00571 662 aaKnown RBP eCLIP22.93■■□□□ 1.263e-11■■■□□ 16.8
C9orf3-222ENST00000496567 AKR1B10O60218 316 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 GZMAP12544 262 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 NSFP46459 744 aaKnown RBP22.93■■□□□ 1.26
C9orf3-222ENST00000496567 RPL34P49207 117 aaKnown RBP22.93■■□□□ 1.26
C9orf3-222ENST00000496567 RGS7P49802 495 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 CENPCQ03188 943 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 CCDC85BQ15834 202 aaPredicted RBP22.93■■□□□ 1.26
C9orf3-222ENST00000496567 RAB41Q5JT25 222 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 DNAJB7Q7Z6W7 309 aaPredicted RBP22.93■■□□□ 1.26
C9orf3-222ENST00000496567 ERICH1Q86X53 443 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 CPA5Q8WXQ8 436 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 PPP1R13BQ96KQ4 1090 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 SLC4A5Q9BY07 1137 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 MIS12Q9H081 205 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 KIF11P52732 1056 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 TMEM110Q86TL2 294 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 CCDC170Q8IYT3 715 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 C12orf76Q8N812 135 aaPredicted RBP22.93■■□□□ 1.26
C9orf3-222ENST00000496567 IPO4Q8TEX9 1081 aaKnown RBP22.93■■□□□ 1.26
C9orf3-222ENST00000496567 SYNCQ9H7C4 482 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 CLEC1BQ9P126 229 aa22.93■■□□□ 1.26
C9orf3-222ENST00000496567 UXTQ9UBK9 157 aaPredicted RBP22.93■■□□□ 1.26
C9orf3-222ENST00000496567 PATJQ8NI35 1801 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 PTMAP06454 111 aaKnown RBP22.92■■□□□ 1.26
C9orf3-222ENST00000496567 PTPN2P17706 415 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 TKTL1P51854 596 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 SLC18A3Q16572 532 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 ASTE1Q2TB18 679 aaPredicted RBP22.92■■□□□ 1.26
C9orf3-222ENST00000496567 RARS2Q5T160 578 aaKnown RBP22.92■■□□□ 1.26
C9orf3-222ENST00000496567 ACAD10Q6JQN1 1059 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 TMC5Q6UXY8 1006 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 GPRIN1Q7Z2K8 1008 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 SIX6OS1Q8N1H7 587 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 SMG7Q92540 1137 aaKnown RBP22.92■■□□□ 1.26
C9orf3-222ENST00000496567 ZNF707Q96C28 371 aaPredicted RBP22.92■■□□□ 1.26
C9orf3-222ENST00000496567 TRMT2BQ96GJ1 504 aaKnown RBP22.92■■□□□ 1.26
C9orf3-222ENST00000496567 CPXM1Q96SM3 734 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 TTLL2Q9BWV7 592 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 PIDD1Q9HB75 910 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 IL37Q9NZH6 218 aa22.92■■□□□ 1.26
C9orf3-222ENST00000496567 MAGED2Q9UNF1 606 aaPredicted RBP22.92■■□□□ 1.26
C9orf3-222ENST00000496567 A0A087X0T9 212 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 NRDCO43847 1150 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 TBX10O75333 385 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 FAM228BP0C875 321 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 LCP1P13796 627 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 HMGA1P17096 107 aaKnown RBP22.91■■□□□ 1.26
C9orf3-222ENST00000496567 YWHAQP27348 245 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 CYLC1P35663 651 aaPredicted RBP22.91■■□□□ 1.26
C9orf3-222ENST00000496567 ITIH3Q06033 890 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 ADIGQ0VDE8 80 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 MTMR3Q13615 1198 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 SKIV2LQ15477 1246 aaKnown RBP22.91■■□□□ 1.26
C9orf3-222ENST00000496567 SYCE2Q6PIF2 218 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 STKLD1Q8NE28 680 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 CCDC112Q8NEF3 446 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 SCAMP5Q8TAC9 235 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 MYRFLQ96LU7 910 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 CNGB3Q9NQW8 809 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 USP3Q9Y6I4 520 aa22.91■■□□□ 1.26
C9orf3-222ENST00000496567 RTN2O75298 545 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 FBXO21O94952 628 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 LTBRP36941 435 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 IFRD2Q12894 506 aaPredicted RBP22.9■■□□□ 1.26
C9orf3-222ENST00000496567 PTPN20Q4JDL3 420 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 ALKBH5Q6P6C2 394 aaKnown RBP22.9■■□□□ 1.26
C9orf3-222ENST00000496567 PHF13Q86YI8 300 aaPredicted RBP22.9■■□□□ 1.26
C9orf3-222ENST00000496567 LRRC8AQ8IWT6 810 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 LEMD2Q8NC56 503 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 PPM1EQ8WY54 764 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 C18orf8Q96DM3 657 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 ASAH2Q9NR71 780 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 NAGPAQ9UK23 515 aa22.9■■□□□ 1.26
C9orf3-222ENST00000496567 FAM92AA1XBS5 289 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 TMCO5BA8MYB1 307 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 E5RJQ4 531 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 FGF19O95750 216 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 ZBED1O96006 694 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 MMP8P22894 467 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 GABRB2P47870 512 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 USP46P62068 366 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 GFPT1Q06210 699 aaPredicted RBP22.89■■□□□ 1.26
C9orf3-222ENST00000496567 DLX2Q07687 328 aaPredicted RBP22.89■■□□□ 1.26
C9orf3-222ENST00000496567 CES5AQ6NT32 575 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 GPR149Q86SP6 731 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 TMEM139Q8IV31 216 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 SCML4Q8N228 414 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 SLITRK1Q96PX8 696 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 PPP1R9BQ96SB3 815 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 CORO1BQ9BR76 489 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 ADAM7Q9H2U9 754 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms