RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 KDM4CQ9H3R0 1056 aa12.07□□□□□ -0.48
CDCA7-208ENST00000496441 ECT2Q9H8V3 914 aa12.07□□□□□ -0.48
CDCA7-208ENST00000496441 RAB6BQ9NRW1 208 aa12.07□□□□□ -0.48
CDCA7-208ENST00000496441 GGA2Q9UJY4 613 aa12.07□□□□□ -0.48
CDCA7-208ENST00000496441 PDHXO00330 501 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 TSPAN1O60635 241 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 FAM155BO75949 473 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 HMGCRP04035 888 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 LCP1P13796 627 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 TAC1P20366 129 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 CDH5P33151 784 aaPredicted RBP12.06□□□□□ -0.48
CDCA7-208ENST00000496441 ARL4CP56559 192 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 COPS2P61201 443 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 PPP1R2P3Q6NXS1 205 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 MTHFD1LQ6UB35 978 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 FASTKD5Q7L8L6 764 aaKnown RBP12.06□□□□□ -0.48
CDCA7-208ENST00000496441 PARP9Q8IXQ6 854 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 PPIL6Q8IXY8 311 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 GPRC5AQ8NFJ5 357 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 CCHCR1Q8TD31 782 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 WDR83Q9BRX9 315 aaKnown RBP12.06□□□□□ -0.48
CDCA7-208ENST00000496441 NT5C1AQ9BXI3 368 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 MROH8Q9H579 483 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 ASNSD1Q9NWL6 643 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 DRG1Q9Y295 367 aaKnown RBP12.06□□□□□ -0.48
CDCA7-208ENST00000496441 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.06□□□□□ -0.48
CDCA7-208ENST00000496441 ASB14A6NK59 587 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 A8MUI8 341 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 RASSF9O75901 435 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 GPD1P21695 349 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 EPHX2P34913 555 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 ELK3P41970 407 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 RABGGTBP53611 331 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 MGAT5Q09328 741 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 PPIL2Q13356 520 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 GRIK4Q16099 956 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 ZNF618Q5T7W0 954 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 LVRNQ6Q4G3 990 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 BBS12Q6ZW61 710 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 CATSPER4Q7RTX7 472 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 EXOC8Q8IYI6 725 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 PDIK1LQ8N165 341 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 FAM172AQ8WUF8 416 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 FAF2Q96CS3 445 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 PAFAH2Q99487 392 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 LHX5Q9H2C1 402 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
CDCA7-208ENST00000496441 KLHL14Q9P2G3 628 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 DCTN4Q9UJW0 460 aa12.06□□□□□ -0.48
CDCA7-208ENST00000496441 BARX2Q9UMQ3 279 aaPredicted RBP12.06□□□□□ -0.48
CDCA7-208ENST00000496441 LAMA3Q16787 3333 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 ALOX15BO15296 676 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 APRTP07741 180 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 P4HA1P13674 534 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 CCDC130P13994 396 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 ADRA1DP25100 572 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 ROR1Q01973 937 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 LAMC2Q13753 1193 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 NIPA2Q8N8Q9 360 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 C16orf70Q9BSU1 422 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 NXF3Q9H4D5 531 aaKnown RBP12.05□□□□□ -0.48
CDCA7-208ENST00000496441 PHTF1Q9UMS5 762 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 DYNC1LI2O43237 492 aaPredicted RBP12.05□□□□□ -0.48
CDCA7-208ENST00000496441 MCF2P10911 925 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 FGFR1P11362 822 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 VDRP11473 427 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 GBP2P32456 591 aaPredicted RBP12.05□□□□□ -0.48
CDCA7-208ENST00000496441 SLC26A2P50443 739 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 RBP5P82980 135 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 DPYSL3Q14195 570 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 ZNF268Q14587 947 aaPredicted RBP12.05□□□□□ -0.48
CDCA7-208ENST00000496441 ITIH4Q14624 930 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 ZNF449Q6P9G9 518 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 PPP1R21Q6ZMI0 780 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 POLNQ7Z5Q5 900 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 TTC30AQ86WT1 665 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 CCDC110Q8TBZ0 833 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 CEP41Q9BYV8 373 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 CCDC134Q9H6E4 229 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 LGALS13Q9UHV8 139 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 RABGEF1Q9UJ41 708 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 SHOC2Q9UQ13 582 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 DOCK3Q8IZD9 2030 aa12.05□□□□□ -0.48
CDCA7-208ENST00000496441 A8MXQ7 604 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 APOC4-APOC2K7ER74 178 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 IGF2BP3O00425 579 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDCA7-208ENST00000496441 ADCY6O43306 1168 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 APOC2P02655 101 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 YBX3P16989 372 aaKnown RBP eCLIP12.04□□□□□ -0.481e-6■□□□□ 9.1
CDCA7-208ENST00000496441 SMPD1P17405 629 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 RBL1P28749 1068 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 MSH2P43246 934 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 GEMIN4P57678 1058 aaKnown RBP12.04□□□□□ -0.48
CDCA7-208ENST00000496441 TNFAIP2Q03169 654 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 SNAPC2Q13487 334 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 SNCBQ16143 134 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 ZNF484Q5JVG2 852 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 BSPRYQ5W0U4 402 aa12.04□□□□□ -0.48
CDCA7-208ENST00000496441 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms