RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 DNAI2Q9GZS0 605 aa16.7■□□□□ 0.26
HDAC4-213ENST00000496347 EBF3Q9H4W6 596 aa16.7■□□□□ 0.26
HDAC4-213ENST00000496347 LMAN1LQ9HAT1 526 aa16.7■□□□□ 0.26
HDAC4-213ENST00000496347 HMGXB4Q9UGU5 601 aa16.7■□□□□ 0.26
HDAC4-213ENST00000496347 R4GN57 208 aa16.7■□□□□ 0.26
HDAC4-213ENST00000496347 KIAA1549LQ6ZVL6 1849 aa16.7■□□□□ 0.26
HDAC4-213ENST00000496347 CLDN5O00501 218 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 KINO60870 393 aaKnown RBP16.69■□□□□ 0.26
HDAC4-213ENST00000496347 OAS1P00973 400 aaKnown RBP16.69■□□□□ 0.26
HDAC4-213ENST00000496347 HDCP19113 662 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 PRCPP42785 496 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 SLC7A9P82251 487 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 CSTF1Q05048 431 aaKnown RBP16.69■□□□□ 0.26
HDAC4-213ENST00000496347 STIM1Q13586 685 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 SPOPLQ6IQ16 392 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 ACOT1Q86TX2 421 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 FUKQ8N0W3 1084 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 NUP93Q8N1F7 819 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 CRYBG2Q8N1P7 616 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 SPEM1Q8N4L4 309 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 ARL14EPQ8N8R7 260 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-213ENST00000496347 OSCP1Q8WVF1 389 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 EXOC4Q96A65 974 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 MED10Q9BTT4 135 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 FAM124BQ9H5Z6 455 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-213ENST00000496347 GKN1Q9NS71 199 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 ZSCAN32Q9NX65 697 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 PCDHA5Q9Y5H7 936 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 CEP250Q9BV73 2442 aa16.69■□□□□ 0.26
HDAC4-213ENST00000496347 PSMA7O14818 248 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 PAPSS2O95340 614 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-213ENST00000496347 TDGF1P13385 188 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 YWHAQP27348 245 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 PPP1R2P41236 205 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 IFNAR2P48551 515 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 TUBP50607 506 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 SLC5A3P53794 718 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 FKBP3Q00688 224 aaKnown RBP16.68■□□□□ 0.26
HDAC4-213ENST00000496347 TAF10Q12962 218 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 PON2Q15165 354 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 TTC39CQ8N584 583 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 ZBTB44Q8NCP5 570 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 TTC8Q8TAM2 541 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 SLC2A14Q8TDB8 520 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 SH3RF2Q8TEC5 729 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 APOBEC3GQ9HC16 384 aaKnown RBP16.68■□□□□ 0.26
HDAC4-213ENST00000496347 COMMD8Q9NX08 183 aa16.68■□□□□ 0.26
HDAC4-213ENST00000496347 DUS2Q9NX74 493 aaKnown RBP16.68■□□□□ 0.26
HDAC4-213ENST00000496347 AP1G2O75843 785 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 CCDC130P13994 396 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 ARSAP15289 507 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 NRLP54845 237 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 TMEM196Q5HYL7 178 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 WDR44Q5JSH3 913 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 PAQR9Q6ZVX9 377 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 DDX42Q86XP3 938 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC4-213ENST00000496347 ADSSL1Q8N142 457 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 FBXL13Q8NEE6 735 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 ATRIPQ8WXE1 791 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 FBXO32Q969P5 355 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 ELMO3Q96BJ8 720 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 CYP2S1Q96SQ9 504 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 NT5C1AQ9BXI3 368 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 MMRN2Q9H8L6 949 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 CSNK1G1Q9HCP0 422 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 PNPLA8Q9NP80 782 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 IL37Q9NZH6 218 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 DCHS1Q96JQ0 3298 aa16.67■□□□□ 0.26
HDAC4-213ENST00000496347 FAM92AA1XBS5 289 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 OTOL1A6NHN0 477 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-213ENST00000496347 TRDMT1O14717 391 aaKnown RBP16.66■□□□□ 0.26
HDAC4-213ENST00000496347 TNFRSF10BO14763 440 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 LILRB5O75023 590 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 CILPO75339 1184 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 FAM200BP0CF97 657 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 GRSF1Q12849 480 aaKnown RBP eCLIP16.66■□□□□ 0.26
HDAC4-213ENST00000496347 EML3Q32P44 896 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 DCAF17Q5H9S7 520 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-213ENST00000496347 SNX30Q5VWJ9 437 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 FOXR2Q6PJQ5 311 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 Q6ZS52 159 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 CHFRQ96EP1 664 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 EEF2KMTQ96G04 330 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 KCNK16Q96T55 309 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 HNRNPABQ99729 332 aaKnown RBP16.66■□□□□ 0.26
HDAC4-213ENST00000496347 EPC1Q9H2F5 836 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 FBXO44Q9H4M3 255 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 ECT2Q9H8V3 914 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 RBM12Q9NTZ6 932 aaKnown RBP16.66■□□□□ 0.26
HDAC4-213ENST00000496347 FAM49BQ9NUQ9 324 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 WNT6Q9Y6F9 365 aa16.66■□□□□ 0.26
HDAC4-213ENST00000496347 LEFTY2O00292 366 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 NFATC1O95644 943 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 CXCL12P48061 93 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 IFRD2Q12894 506 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-213ENST00000496347 ORC1Q13415 861 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 GAS6Q14393 721 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 ERCC4Q92889 916 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-213ENST00000496347 DHTKD1Q96HY7 919 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms