RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	IP6K2	Q9UHH9	426 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	CCNL1	Q9UK58	526 aa	Predicted RBP	3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	ANKRD6	Q9Y2G4	727 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	INSIG1	O15503	277 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	PMPCB	O75439	489 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	USP1	O94782	785 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	FGB	P02675	491 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	A1BG	P04217	495 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	VCAM1	P19320	739 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	CCKBR	P32239	447 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	HTRA4	P83105	476 aa	Predicted RBP	3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	FGL2	Q14314	439 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	LRRC41	Q15345	812 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	TRIM71	Q2Q1W2	868 aa	Known RBP	3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	MGAT5B	Q3V5L5	792 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	PLA1A	Q53H76	456 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	PXDC1	Q5TGL8	231 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	CCDC181	Q5TID7	509 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	SAMD14	Q8IZD0	417 aa	Predicted RBP	3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	NANOGP1	Q8N7R0	232 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	BPIFB1	Q8TDL5	484 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	ADAMTS18	Q8TE60	1221 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	TMEM171	Q8WVE6	324 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	KBTBD7	Q8WVZ9	684 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	MAML1	Q92585	1016 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	PPP2R3C	Q969Q6	453 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	MTFMT	Q96DP5	389 aa	Known RBP	3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	MMS19	Q96T76	1030 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	EFHD1	Q9BUP0	239 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	GBA2	Q9HCG7	927 aa	Predicted RBP	3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	PIH1D1	Q9NWS0	290 aa	Known RBP	3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	AMFR	Q9UKV5	643 aa		3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	THRAP3	Q9Y2W1	955 aa	Known RBP	3.1	□□□□□ -1.91
RAD50-208	ENST00000496204	TMEM233	B4DJY2	109 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	BTBD19	C9JJ37	291 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	UBE2Q2L	H0YL09	131 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204		H3BML4	177 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	BTN3A1	O00481	513 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	SOCS2	O14508	198 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	ADAM10	O14672	748 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	AP1G1	O43747	822 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	UBXN7	O94888	489 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	XRCC6	P12956	609 aa	Known RBP eCLIP	3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	APEH	P13798	732 aa	Known RBP	3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	PRF1	P14222	555 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	ATF7	P17544	494 aa	Predicted RBP	3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	HTR1B	P28222	390 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	GK	P32189	559 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	THBS4	P35443	961 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	KRT17	Q04695	432 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	RAPGEF1	Q13905	1077 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	SEC23B	Q15437	767 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	CERKL	Q49MI3	558 aa	Predicted RBP	3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	KLHL22	Q53GT1	634 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	AWAT1	Q58HT5	328 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	C10orf25	Q5T742	122 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	NOL8	Q76FK4	1167 aa	Known RBP	3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	SFTPA1	Q8IWL2	248 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	LINC01465	Q8N7H1	131 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	PRSS3P2	Q8NHM4	247 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	PPP1R35	Q8TAP8	253 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	FAM118B	Q9BPY3	351 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	DPCD	Q9BVM2	203 aa	Predicted RBP	3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	RHOBTB2	Q9BYZ6	727 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	ZMAT3	Q9HA38	289 aa	Known RBP	3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	ATP6V0A4	Q9HBG4	840 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	TRMT13	Q9NUP7	481 aa	Known RBP	3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	LPAR3	Q9UBY5	353 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	ZNF580	Q9UK33	172 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	G3BP2	Q9UN86	482 aa	Known RBP	3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	LRP12	Q9Y561	859 aa		3.09	□□□□□ -1.91
RAD50-208	ENST00000496204	OFD1	O75665	1012 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	MT-CO3	P00414	261 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	DIO1	P49895	249 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	AGFG1	P52594	562 aa	Known RBP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	POLG	P54098	1239 aa	Predicted RBP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	KRTAP10-6	P60371	365 aa	Predicted RBP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	SRSF1	Q07955	248 aa	Known RBP eCLIP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	LMAN2	Q12907	356 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	ZNF268	Q14587	947 aa	Predicted RBP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	RBMS2	Q15434	407 aa	Known RBP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	TWIST1	Q15672	202 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	LEXM	Q3ZCV2	418 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	ODR4	Q5SWX8	454 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	IFIT1B	Q5T764	474 aa	Known RBP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	RUSC1-AS1	Q66K80	236 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	LMBRD2	Q68DH5	695 aa	Predicted RBP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	SHC4	Q6S5L8	630 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	ZDHHC24	Q6UX98	284 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	SERPINA13P	Q6UXR4	307 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	MRPL10	Q7Z7H8	261 aa	Known RBP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	ZDHHC17	Q8IUH5	632 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	DENND1C	Q8IV53	801 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	SIRT6	Q8N6T7	355 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	JDP2	Q8WYK2	163 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	RAPGEF4	Q8WZA2	1011 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	MAP4K1	Q92918	833 aa		3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	FYTTD1	Q96QD9	318 aa	Known RBP	3.08	□□□□□ -1.92
RAD50-208	ENST00000496204	ACO2	Q99798	780 aa	Known RBP	3.08	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms