RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 SIRT6Q8N6T7 355 aa5.37□□□□□ -1.55
CLTC-208ENST00000496076 MAP4K1Q92918 833 aa5.37□□□□□ -1.55
CLTC-208ENST00000496076 GPATCH3Q96I76 525 aa5.37□□□□□ -1.55
CLTC-208ENST00000496076 TRMT13Q9NUP7 481 aaKnown RBP5.37□□□□□ -1.55
CLTC-208ENST00000496076 TNKSO95271 1327 aa5.37□□□□□ -1.55
CLTC-208ENST00000496076 ZMYM2Q9UBW7 1377 aa5.37□□□□□ -1.55
CLTC-208ENST00000496076 TLR2O60603 784 aa5.36□□□□□ -1.55
CLTC-208ENST00000496076 PSG1P11464 419 aa5.36□□□□□ -1.55
CLTC-208ENST00000496076 UCP3P55916 312 aa5.36□□□□□ -1.55
CLTC-208ENST00000496076 PNISRQ8TF01 805 aaKnown RBP5.36□□□□□ -1.55
CLTC-208ENST00000496076 SLC35A4Q96G79 324 aa5.36□□□□□ -1.55
CLTC-208ENST00000496076 HIPK2Q9H2X6 1198 aa5.36□□□□□ -1.55
CLTC-208ENST00000496076 HEY2Q9UBP5 337 aa5.36□□□□□ -1.55
CLTC-208ENST00000496076 ZNF112Q9UJU3 913 aa5.36□□□□□ -1.55
CLTC-208ENST00000496076 TMX2Q9Y320 296 aa5.36□□□□□ -1.55
CLTC-208ENST00000496076 SNX14Q9Y5W7 946 aa5.36□□□□□ -1.55
CLTC-208ENST00000496076 RNF8O76064 485 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 MT-CO3P00414 261 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 CYP2C9P11712 490 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 ME1P48163 572 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 DGKEP52429 567 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 ID2Q02363 134 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 SRSF1Q07955 248 aaKnown RBP eCLIP5.35□□□□□ -1.55
CLTC-208ENST00000496076 PTPROQ16827 1216 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 ZIK1Q3SY52 487 aaPredicted RBP5.35□□□□□ -1.55
CLTC-208ENST00000496076 C4orf46Q504U0 113 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 AWAT1Q58HT5 328 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 RNF187Q5TA31 235 aaPredicted RBP5.35□□□□□ -1.55
CLTC-208ENST00000496076 PIM3Q86V86 326 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 ZNF548Q8NEK5 533 aaPredicted RBP5.35□□□□□ -1.55
CLTC-208ENST00000496076 RSPRY1Q96DX4 576 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 VPS33BQ9H267 617 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 SARS2Q9NP81 518 aaKnown RBP5.35□□□□□ -1.55
CLTC-208ENST00000496076 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
CLTC-208ENST00000496076 TTC3P53804 2025 aa5.35□□□□□ -1.55
CLTC-208ENST00000496076 CES2O00748 559 aa5.34□□□□□ -1.55
CLTC-208ENST00000496076 SMAD6O43541 496 aaKnown RBP5.34□□□□□ -1.55
CLTC-208ENST00000496076 POU2F2P09086 479 aa5.34□□□□□ -1.55
CLTC-208ENST00000496076 KRT17Q04695 432 aa5.34□□□□□ -1.55
CLTC-208ENST00000496076 NPY5RQ15761 445 aa5.34□□□□□ -1.55
CLTC-208ENST00000496076 PGS1Q32NB8 556 aa5.34□□□□□ -1.55
CLTC-208ENST00000496076 DEF8Q6ZN54 512 aa5.34□□□□□ -1.55
CLTC-208ENST00000496076 LIX1LQ8IVB5 337 aa5.34□□□□□ -1.55
CLTC-208ENST00000496076 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.34□□□□□ -1.55
CLTC-208ENST00000496076 CELF5Q8N6W0 485 aaKnown RBP5.34□□□□□ -1.55
CLTC-208ENST00000496076 RBMXL3Q8N7X1 1067 aaKnown RBP5.34□□□□□ -1.55
CLTC-208ENST00000496076 MESP1Q9BRJ9 268 aa5.34□□□□□ -1.55
CLTC-208ENST00000496076 hCG_2014768A0A024R1R8 64 aa5.33□□□□□ -1.56
CLTC-208ENST00000496076 MYO1CO00159 1063 aa5.33□□□□□ -1.56
CLTC-208ENST00000496076 IBSPP21815 317 aaPredicted RBP5.33□□□□□ -1.56
CLTC-208ENST00000496076 KCNA3P22001 575 aa5.33□□□□□ -1.56
CLTC-208ENST00000496076 SLC11A2P49281 568 aa5.33□□□□□ -1.56
CLTC-208ENST00000496076 COPB1P53618 953 aaKnown RBP5.33□□□□□ -1.56
CLTC-208ENST00000496076 FAM50AQ14320 339 aaKnown RBP5.33□□□□□ -1.56
CLTC-208ENST00000496076 MGAT5BQ3V5L5 792 aa5.33□□□□□ -1.56
CLTC-208ENST00000496076 C17orf80Q9BSJ5 609 aa5.33□□□□□ -1.56
CLTC-208ENST00000496076 SPC25Q9HBM1 224 aa5.33□□□□□ -1.56
CLTC-208ENST00000496076 PROCRQ9UNN8 238 aa5.33□□□□□ -1.56
CLTC-208ENST00000496076 HS3ST3B1Q9Y662 390 aa5.33□□□□□ -1.56
CLTC-208ENST00000496076 B4DGG1 531 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 GTPBP1O00178 669 aaKnown RBP5.32□□□□□ -1.56
CLTC-208ENST00000496076 PSMD9O00233 223 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 PMPCBO75439 489 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 TOMM40O96008 361 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 PHKG2P15735 406 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 GKP32189 559 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 RECQLP46063 649 aaPredicted RBP5.32□□□□□ -1.56
CLTC-208ENST00000496076 SUMO2P61956 95 aaKnown RBP5.32□□□□□ -1.56
CLTC-208ENST00000496076 IGBP1P78318 339 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 SEC23BQ15437 767 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 TMTC4Q5T4D3 741 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 UBAP2Q5T6F2 1119 aaKnown RBP5.32□□□□□ -1.56
CLTC-208ENST00000496076 TMEM65Q6PI78 240 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 COLCA1Q6ZS62 124 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 CATIPQ7Z7H3 387 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 ANKRD13BQ86YJ7 626 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 KRT78Q8N1N4 520 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 TMEM171Q8WVE6 324 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 THOC3Q96J01 351 aaKnown RBP5.32□□□□□ -1.56
CLTC-208ENST00000496076 FAM234AQ9H0X4 552 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 LPAR3Q9UBY5 353 aa5.32□□□□□ -1.56
CLTC-208ENST00000496076 CNOT3O75175 753 aaKnown RBP5.31□□□□□ -1.56
CLTC-208ENST00000496076 TULP3O75386 442 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 THP07101 528 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 CTSAP10619 480 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 XRCC6P12956 609 aaKnown RBP eCLIP5.31□□□□□ -1.56
CLTC-208ENST00000496076 CDKN2AP42771 156 aaKnown RBP5.31□□□□□ -1.56
CLTC-208ENST00000496076 CDKN1CP49918 316 aaPredicted RBP5.31□□□□□ -1.56
CLTC-208ENST00000496076 PRKAG1P54619 331 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 WNT3P56703 355 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 ANAPC15P60006 121 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 LMAN2Q12907 356 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 MLC1Q15049 377 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 ANO7Q6IWH7 933 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 LVRNQ6Q4G3 990 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 ARFGAP1Q8N6T3 406 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 PPP2R3CQ969Q6 453 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 CDK5RAP3Q96JB5 506 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 CAMK1GQ96NX5 476 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 CTAGE1Q96RT6 745 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms