RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 WDR44Q5JSH3 913 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 FRMD5Q7Z6J6 570 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 SLC2A14Q8TDB8 520 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 OVCA2Q8WZ82 227 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 TATDN2Q93075 761 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 NT5C1AQ9BXI3 368 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 RNF38Q9H0F5 515 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 METTL14Q9HCE5 456 aaKnown RBP18.34■□□□□ 0.53
CTNS-207ENST00000495445 TRPC7Q9HCX4 862 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 ARMCX3Q9UH62 379 aaPredicted RBP18.34■□□□□ 0.53
CTNS-207ENST00000495445 ARHGAP26Q9UNA1 814 aa18.34■□□□□ 0.53
CTNS-207ENST00000495445 ZFHX2Q9C0A1 2572 aaPredicted RBP18.34■□□□□ 0.53
CTNS-207ENST00000495445 OTOL1A6NHN0 477 aaPredicted RBP18.33■□□□□ 0.52
CTNS-207ENST00000495445 SPECC1L-ADORA2AF8WAN1 911 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 AP1G2O75843 785 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 ZDHHC11BP0C7U3 371 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 CCDC130P13994 396 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 YWHAQP27348 245 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 CTHP32929 405 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 SOX9P48436 509 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 PDE6CP51160 858 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 KPNA1P52294 538 aaPredicted RBP18.33■□□□□ 0.52
CTNS-207ENST00000495445 SLC7A9P82251 487 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 USP4Q13107 963 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 RUNX3Q13761 415 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 ITPRIPL2Q3MIP1 535 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 TXNDC11Q6PKC3 985 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 CLEC17AQ6ZS10 378 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 KIAA1958Q8N8K9 716 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 CCDC150Q8NCX0 1101 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 SCAMP5Q8TAC9 235 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 CHFRQ96EP1 664 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 MED10Q9BTT4 135 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 CHRDQ9H2X0 955 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 LMAN1LQ9HAT1 526 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 DMAP1Q9NPF5 467 aaPredicted RBP18.33■□□□□ 0.52
CTNS-207ENST00000495445 FBXO4Q9UKT5 387 aa18.33■□□□□ 0.52
CTNS-207ENST00000495445 NDRG2Q9UN36 371 aaKnown RBP18.33■□□□□ 0.52
CTNS-207ENST00000495445 HHLA1C9JL84 531 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 CLSTN1O94985 981 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 OAS1P00973 400 aaKnown RBP18.32■□□□□ 0.52
CTNS-207ENST00000495445 SP9P0CG40 484 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 ZNF528Q3MIS6 628 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 TTC39CQ8N584 583 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 TRIML1Q8N9V2 468 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 OSCP1Q8WVF1 389 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 NELFBQ8WX92 580 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 CYFIP2Q96F07 1278 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 SLITRK1Q96PX8 696 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 KIAA1468Q9P260 1216 aa18.32■□□□□ 0.52
CTNS-207ENST00000495445 BIN1O00499 593 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 CKMP06732 381 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 SLC5A3P53794 718 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 MTF1Q14872 753 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 PDGFRLQ15198 375 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 TCERG1LQ5VWI1 586 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 TRIM68Q6AZZ1 485 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 CLEC20AQ6ZU45 233 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 PDZD8Q8NEN9 1154 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 TTC8Q8TAM2 541 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 SH3RF2Q8TEC5 729 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 NELL1Q92832 810 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 IER2Q9BTL4 223 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 EBF3Q9H4W6 596 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 KRT82Q9NSB4 513 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 FAM49BQ9NUQ9 324 aa18.31■□□□□ 0.52
CTNS-207ENST00000495445 SPATA6Q9NWH7 488 aaPredicted RBP18.31■□□□□ 0.52
CTNS-207ENST00000495445 CHORDC1Q9UHD1 332 aaPredicted RBP18.31■□□□□ 0.52
CTNS-207ENST00000495445 BICDL2A1A5D9 508 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 ARSAP15289 507 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 CD58P19256 250 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 MARSP56192 900 aaKnown RBP18.3■□□□□ 0.52
CTNS-207ENST00000495445 MAP3K7CLP57077 242 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 MTAPQ13126 283 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 CCINQ13939 588 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 GAS6Q14393 721 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 EML3Q32P44 896 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 DCAF17Q5H9S7 520 aaPredicted RBP18.3■□□□□ 0.52
CTNS-207ENST00000495445 KLHL10Q6JEL2 608 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 CC2D1AQ6P1N0 951 aaPredicted RBP18.3■□□□□ 0.52
CTNS-207ENST00000495445 SLC4A11Q8NBS3 891 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 FBXO32Q969P5 355 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 LINC00597Q9H2U6 94 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 PNPLA8Q9NP80 782 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 CISHQ9NSE2 258 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 PATJQ8NI35 1801 aa18.3■□□□□ 0.52
CTNS-207ENST00000495445 CFAP54Q96N23 3096 aa18.29■□□□□ 0.52
CTNS-207ENST00000495445 LEFTY2O00292 366 aa18.29■□□□□ 0.52
CTNS-207ENST00000495445 TRDMT1O14717 391 aaKnown RBP18.29■□□□□ 0.52
CTNS-207ENST00000495445 LAMTOR5O43504 91 aa18.29■□□□□ 0.52
CTNS-207ENST00000495445 FAM200BP0CF97 657 aa18.29■□□□□ 0.52
CTNS-207ENST00000495445 TRIM21P19474 475 aaKnown RBP18.29■□□□□ 0.52
CTNS-207ENST00000495445 FMO5P49326 533 aa18.29■□□□□ 0.52
CTNS-207ENST00000495445 TUBP50607 506 aa18.29■□□□□ 0.52
CTNS-207ENST00000495445 RAD23BP54727 409 aa18.29■□□□□ 0.52
CTNS-207ENST00000495445 CAMK4Q16566 473 aa18.29■□□□□ 0.52
CTNS-207ENST00000495445 DGKKQ5KSL6 1271 aa18.29■□□□□ 0.52
CTNS-207ENST00000495445 PPP1R26Q5T8A7 1209 aaPredicted RBP18.29■□□□□ 0.52
CTNS-207ENST00000495445 UBR7Q8N806 425 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms