RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TMEM175Q9BSA9 504 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 HERPUD2Q9BSE4 406 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 PLVAPQ9BX97 442 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 FUT8Q9BYC5 575 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 HIPK3Q9H422 1215 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 NRDE2Q9H7Z3 1164 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 RC3H2Q9HBD1 1191 aaKnown RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 TMEM30AQ9NV96 361 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 DDX43Q9NXZ2 648 aaKnown RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 DDX56Q9NY93 547 aaKnown RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 IL37Q9NZH6 218 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 HCSTQ9UBK5 93 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 CACNG4Q9UBN1 327 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 HESX1Q9UBX0 185 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 COL4A6Q14031 1691 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 TCRBV7S2A1N4TA0A589 114 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FAM187AA6NFU0 413 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 CASTOR2A6NHX0 329 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 TNFRSF10BO14763 440 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 MDM4O15151 490 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 TP73O15350 636 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 RAD51CO43502 376 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 PHF2O75151 1096 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FBXO21O94952 628 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FYNP06241 537 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 KRT7P08729 469 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 RHOXF2BP0C7M4 288 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 CCDC130P13994 396 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FGFR3P22607 806 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 IL4RP24394 825 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 IVDP26440 423 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 ECHS1P30084 290 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FLT3P36888 993 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 COILP38432 576 aaPredicted RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 CDKN2BP42772 138 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 BRCC3P46736 316 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FNTAP49354 379 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 MRPS5P82675 430 aaKnown RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 CBLBQ13191 982 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 ZNF211Q13398 564 aaPredicted RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 MAPRE1Q15691 268 aaKnown RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 CCNG2Q16589 344 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 LONRF2Q1L5Z9 754 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 ATP13A4Q4VNC1 1196 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 BOLA3Q53S33 107 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 EFHC1Q5JVL4 640 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 SEL1L2Q5TEA6 688 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 DUPD1Q68J44 220 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 TXNRD3NBQ6F5E7 133 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 CNKSR3Q6P9H4 555 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 DSTYKQ6XUX3 929 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 MAATS1Q7Z4T9 603 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 PHLDB2Q86SQ0 1253 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 NPAS4Q8IUM7 802 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 PSTKQ8IV42 348 aaKnown RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 SCUBE3Q8IX30 993 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 EFCAB3Q8N7B9 438 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 CCDC26Q8TAB7 109 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 URGCPQ8TCY9 931 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 RXFP2Q8WXD0 754 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 CAVIN3Q969G5 261 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FAF2Q96CS3 445 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 ZNF689Q96CS4 500 aaPredicted RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 PGAP3Q96FM1 320 aaPredicted RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 PCED1BQ96HM7 432 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 RBM41Q96IZ5 413 aaKnown RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 SLITRK1Q96PX8 696 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 KRT12Q99456 494 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 RHOXF2Q9BQY4 288 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 OXCT2Q9BYC2 517 aaPredicted RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 ADAM33Q9BZ11 813 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FRMD8P1Q9BZ68 369 aaPredicted RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 OSBPL8Q9BZF1 889 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FAM129AQ9BZQ8 928 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 ZCWPW1Q9H0M4 648 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 CNGB3Q9NQW8 809 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 METTL5Q9NRN9 209 aaKnown RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 HOMER3Q9NSC5 361 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 FAM49BQ9NUQ9 324 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 ARGLU1Q9NWB6 273 aaPredicted RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 DRG1Q9Y295 367 aaKnown RBP7.13□□□□□ -1.27
MSH5-217ENST00000494458 PCDHB7Q9Y5E2 793 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 TSC2P49815 1807 aa7.13□□□□□ -1.27
MSH5-217ENST00000494458 TET1Q8NFU7 2136 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 hCG_1818297A0A087WSY0 165 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 ABHD14A-ACY1A0A1B0GW23 586 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 FAM92AA1XBS5 289 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 TMEM110-MUSTN1A8MSY1 372 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 NRP1O14786 923 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 TRAPPC3O43617 180 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 PQBP1O60828 265 aaKnown RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 DGKIO75912 1065 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 TIMP1P01033 207 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 ALDH2P05091 517 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 GALTP07902 379 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 MYBL2P10244 700 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 PDGFRAP16234 1089 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 GPD1P21695 349 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 KDELR1P24390 212 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 PSMA2P25787 234 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms