RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ASPAP45381 313 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 CXCL12P48061 93 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 GCLMP48507 274 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 FNTBP49356 437 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 PGFP49763 221 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 GALK1P51570 392 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 NDST1P52848 882 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 AP3M2P53677 418 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 USP4Q13107 963 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 SRSF5Q13243 272 aaKnown RBP9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ADAM9Q13443 819 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 CCINQ13939 588 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ZNF268Q14587 947 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-219ENST00000494069 KCNB1Q14721 858 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 SGSM1Q2NKQ1 1148 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ZCWPW2Q504Y3 356 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 FSTL4Q6MZW2 842 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ZC3H14Q6PJT7 736 aaKnown RBP9.08□□□□□ -0.96
LRCH3-219ENST00000494069 DENND5BQ6ZUT9 1274 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 FAM35AQ86V20 835 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 FAM186BQ8IYM0 893 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 FUKQ8N0W3 1084 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 GUF1Q8N442 669 aaKnown RBP9.08□□□□□ -0.96
LRCH3-219ENST00000494069 C12orf29Q8N999 325 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ZMIZ2Q8NF64 920 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ENGASEQ8NFI3 743 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 SCAMP5Q8TAC9 235 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 TAS1R2Q8TE23 839 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ATRIPQ8WXE1 791 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 MSANTD3Q96H12 275 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 C8orf48Q96LL4 319 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 TWNKQ96RR1 684 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 MED10Q9BTT4 135 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 TTLL2Q9BWV7 592 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ELOVL4Q9GZR5 314 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 SEMA4AQ9H3S1 761 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ECT2Q9H8V3 914 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 KIF9Q9HAQ2 790 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 DUS2Q9NX74 493 aaKnown RBP9.08□□□□□ -0.96
LRCH3-219ENST00000494069 SMPD4Q9NXE4 827 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 TRPM5Q9NZQ8 1165 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 CHORDC1Q9UHD1 332 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ZMYM5Q9UJ78 669 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 FRMD4BQ9Y2L6 1034 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 PCDHGA2Q9Y5H1 932 aa9.08□□□□□ -0.96
LRCH3-219ENST00000494069 ZNF638Q14966 1978 aaKnown RBP9.08□□□□□ -0.96
LRCH3-219ENST00000494069 OTOGLQ3ZCN5 2332 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 LEFTY2O00292 366 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 TRDMT1O14717 391 aaKnown RBP9.07□□□□□ -0.96
LRCH3-219ENST00000494069 TNFRSF10BO14763 440 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 IKBKBO14920 756 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 HRO43593 1189 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 ASS1P00966 412 aaKnown RBP9.07□□□□□ -0.96
LRCH3-219ENST00000494069 GJA4P35212 333 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 PIK3CAP42336 1068 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 PRCPP42785 496 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 CCR3P51677 355 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 PMS1P54277 932 aaKnown RBP9.07□□□□□ -0.96
LRCH3-219ENST00000494069 NOP14P78316 857 aaKnown RBP9.07□□□□□ -0.96
LRCH3-219ENST00000494069 LRRC32Q14392 662 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 BECN1Q14457 450 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 PDGFRLQ15198 375 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 LPAL2Q16609 132 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 NFIL3Q16649 462 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 EML3Q32P44 896 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 TMEM196Q5HYL7 178 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 DGKKQ5KSL6 1271 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 HEATR6Q6AI08 1181 aaKnown RBP9.07□□□□□ -0.96
LRCH3-219ENST00000494069 CC2D1AQ6P1N0 951 aaPredicted RBP9.07□□□□□ -0.96
LRCH3-219ENST00000494069 KIAA2013Q8IYS2 634 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 SPEM1Q8N4L4 309 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 OSCP1Q8WVF1 389 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 EZH1Q92800 747 aaPredicted RBP9.07□□□□□ -0.96
LRCH3-219ENST00000494069 SEMA4DQ92854 862 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 CCDC47Q96A33 483 aaKnown RBP9.07□□□□□ -0.96
LRCH3-219ENST00000494069 SMOQ99835 787 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 FAM49BQ9NUQ9 324 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 ARHGAP26Q9UNA1 814 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 CPQQ9Y646 472 aa9.07□□□□□ -0.96
LRCH3-219ENST00000494069 ATG2BQ96BY7 2078 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 DCHS1Q96JQ0 3298 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 DMXL1Q9Y485 3027 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 MAPK13O15264 365 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 AP1G2O75843 785 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 KIF20AO95235 890 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 OLFM2O95897 454 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 OAS1P00973 400 aaKnown RBP9.06□□□□□ -0.96
LRCH3-219ENST00000494069 KRT13P13646 458 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 YWHAQP27348 245 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 ADORA2BP29275 332 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 PSMC2P35998 433 aaKnown RBP9.06□□□□□ -0.96
LRCH3-219ENST00000494069 IFNAR2P48551 515 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 PXNP49023 591 aaPredicted RBP9.06□□□□□ -0.96
LRCH3-219ENST00000494069 SLC5A3P53794 718 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 DSG2Q14126 1118 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 GAB4Q2WGN9 574 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 ANKRD40Q6AI12 368 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 ISM2Q6H9L7 571 aa9.06□□□□□ -0.96
LRCH3-219ENST00000494069 C1orf228Q6PIY5 440 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms