RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 TPCN2Q8NHX9 752 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 ERMNQ8TAM6 284 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 CHMP6Q96FZ7 201 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 HES6Q96HZ4 224 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 SEC16BQ96JE7 1060 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 SPAG5Q96R06 1193 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 TMEM175Q9BSA9 504 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 MKNK1Q9BUB5 465 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 HERC2P3Q9BVR0 1158 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 TXLNGYQ9BZA5 131 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 KCTD10Q9H3F6 313 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 RXFP3Q9NSD7 469 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 FAM153AQ9UHL3 310 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 NAGPAQ9UK23 515 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 LHX6Q9UPM6 363 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 MRPS17Q9Y2R5 130 aaKnown RBP11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 CEP83Q9Y592 693 aa11.23□□□□□ -0.61
PDLIM1-205ENST00000493949 FREM2Q5SZK8 3169 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 A0A087X0T9 212 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 SPDYE3A6NKU9 549 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 F8VZ95 297 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 KRIT1O00522 736 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 PODXLO00592 558 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 BACH1O14867 736 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 MGRN1O60291 552 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 DDHD2O94830 711 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 AGTP01019 485 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 ALDH2P05091 517 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 TMEM253P0C7T8 217 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 FAM228BP0C875 321 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 FSHRP23945 695 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 TMOD1P28289 359 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 ATP5DP30049 168 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 TXKP42681 527 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 GPC3P51654 580 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 ZNF131P52739 623 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 IFT88Q13099 833 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 SIM2Q14190 667 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 ERMARDQ5T6L9 678 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 KCTD16Q68DU8 428 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 SWSAP1Q6NVH7 229 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 TAOK1Q7L7X3 1001 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 IRF2BP2Q7Z5L9 587 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 GPR65Q8IYL9 337 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 FUKQ8N0W3 1084 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 LRRC71Q8N4P6 559 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 CCT6BQ92526 530 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 LPPQ93052 612 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 MS4A14Q96JA4 679 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 MBOAT7Q96N66 472 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 FMO2Q99518 471 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 ROPN1BQ9BZX4 212 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 ROPN1Q9HAT0 212 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 ZNF302Q9NR11 478 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 ARMCX3Q9UH62 379 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 AMFRQ9UKV5 643 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 AKT3Q9Y243 479 aa11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1-205ENST00000493949 PDCD11Q14690 1871 aaKnown RBP11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 CYP3A7-CYP3A51PA0A087WV96 503 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 MYO1FO00160 1098 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 O00370 1275 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 C2CD2LO14523 706 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 EIF3DO15371 548 aaKnown RBP eCLIP11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 DHX15O43143 795 aaKnown RBP11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 TGM5O43548 720 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 HRO43593 1189 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 CEP104O60308 925 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 FTCDO95954 541 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 UCHL3P15374 230 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 GAP43P17677 238 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 MUTP22033 750 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 CYP3A7P24462 503 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 GLUD2P49448 558 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 CCR3P51677 355 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 GUCY2FP51841 1108 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 JAM2P57087 298 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 DSG1Q02413 1049 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 KCNH2Q12809 1159 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 AP3B2Q13367 1082 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 UAP1Q16222 522 aaPredicted RBP11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 EXOC3L4Q17RC7 722 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 ODF2Q5BJF6 829 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 C6orf118Q5T5N4 469 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 EFCAB12Q6NXP0 572 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 ALKBH5Q6P6C2 394 aaKnown RBP11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 CPLX4Q7Z7G2 160 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 APLFQ8IW19 511 aaPredicted RBP11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 RFFLQ8WZ73 363 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 GATA6Q92908 595 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 FGF13Q92913 245 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 XPO6Q96QU8 1125 aaKnown RBP11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 PABPC3Q9H361 631 aaKnown RBP11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 NLRC4Q9NPP4 1024 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 CHST7Q9NS84 486 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 MARCH5Q9NX47 278 aa11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 MTRF1LQ9UGC7 380 aaKnown RBP11.21□□□□□ -0.61
PDLIM1-205ENST00000493949 TICRRQ7Z2Z1 1910 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms