RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 SEC24AO95486 1093 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 SPATA31D3P0C874 917 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 FECHP22830 423 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 YWHAQP27348 245 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 CDC25CP30307 473 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 C1QBPQ07021 282 aaKnown RBP15.71■□□□□ 0.11
ACTB-213ENST00000493945 GOLGA8FQ08AF8 430 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 GOLGA8DPQ0D2H9 430 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 SKIV2LQ15477 1246 aaKnown RBP15.71■□□□□ 0.11
ACTB-213ENST00000493945 DDR2Q16832 855 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 CCDC142Q17RM4 750 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 ACAD10Q6JQN1 1059 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 ALKBH5Q6P6C2 394 aaKnown RBP15.71■□□□□ 0.11
ACTB-213ENST00000493945 SPATA31D4Q6ZUB0 917 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 PHF13Q86YI8 300 aaPredicted RBP15.71■□□□□ 0.11
ACTB-213ENST00000493945 GPIHBP1Q8IV16 184 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 STKLD1Q8NE28 680 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 MYLIPQ8WY64 445 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 IRGQQ8WZA9 623 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 FBXO32Q969P5 355 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 C18orf8Q96DM3 657 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 TRMT2BQ96GJ1 504 aaKnown RBP15.71■□□□□ 0.11
ACTB-213ENST00000493945 LPIN3Q9BQK8 851 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 PRKD2Q9BZL6 878 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 TMEM51Q9NW97 253 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 ADAM22Q9P0K1 906 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 SCINQ9Y6U3 715 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 CHD7Q9P2D1 2997 aa15.71■□□□□ 0.11
ACTB-213ENST00000493945 LAMA3Q16787 3333 aa15.71■□□□□ 0.1
ACTB-213ENST00000493945 TRANK1O15050 2925 aa15.71■□□□□ 0.1
ACTB-213ENST00000493945 UNGP13051 313 aaPredicted RBP15.7■□□□□ 0.1
ACTB-213ENST00000493945 PTPN2P17706 415 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 ATF6P18850 670 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 SCNN1AP37088 669 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 TKTL1P51854 596 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 ADIGQ0VDE8 80 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 IFRD2Q12894 506 aaPredicted RBP15.7■□□□□ 0.1
ACTB-213ENST00000493945 ARHGAP15Q53QZ3 475 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 CCDC122Q5T0U0 273 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 ANKRD54Q6NXT1 300 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 WDR59Q6PJI9 974 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 PDZD4Q76G19 769 aaPredicted RBP15.7■□□□□ 0.1
ACTB-213ENST00000493945 LRRC8AQ8IWT6 810 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 SCML4Q8N228 414 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 TTC9BQ8N6N2 239 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 CTNNBL1Q8WYA6 563 aaPredicted RBP15.7■□□□□ 0.1
ACTB-213ENST00000493945 SMG7Q92540 1137 aaKnown RBP15.7■□□□□ 0.1
ACTB-213ENST00000493945 TRIM44Q96DX7 344 aaPredicted RBP15.7■□□□□ 0.1
ACTB-213ENST00000493945 RIPOR3Q96MK2 946 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 PPP1R9BQ96SB3 815 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 KCNK16Q96T55 309 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 ZSWIM1Q9BR11 485 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 MRPL47Q9HD33 250 aaKnown RBP15.7■□□□□ 0.1
ACTB-213ENST00000493945 TLR8Q9NR97 1041 aaKnown RBP15.7■□□□□ 0.1
ACTB-213ENST00000493945 LCMT1Q9UIC8 334 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 NAGPAQ9UK23 515 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 MAGED2Q9UNF1 606 aaPredicted RBP15.7■□□□□ 0.1
ACTB-213ENST00000493945 FAM50BQ9Y247 325 aa15.7■□□□□ 0.1
ACTB-213ENST00000493945 NCANO14594 1321 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 CLUHO75153 1309 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 GREB1Q4ZG55 1949 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 CCDC195A0A1B0GUA6 201 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 EIF3CLB5ME19 914 aaKnown RBP15.69■□□□□ 0.1
ACTB-213ENST00000493945 DDX3XO00571 662 aaKnown RBP eCLIP15.69■□□□□ 0.1
ACTB-213ENST00000493945 CCL16O15467 120 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 VNN2O95498 520 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 ZBED1O96006 694 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 RALAP11233 206 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 LCP1P13796 627 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 CHRNB2P17787 502 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 MMP8P22894 467 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 SSTR3P32745 418 aaPredicted RBP15.69■□□□□ 0.1
ACTB-213ENST00000493945 RGS7P49802 495 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 ADAM15Q13444 863 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 ADGRE1Q14246 886 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 RAB41Q5JT25 222 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 EFHC1Q5JVL4 640 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 PMF1Q6P1K2 205 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 TMEM110Q86TL2 294 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 ZMIZ2Q8NF64 920 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 GIPC2Q8TF65 315 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 CPA5Q8WXQ8 436 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 MYRFLQ96LU7 910 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 NECTIN4Q96NY8 510 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 EIF3CQ99613 913 aaKnown RBP15.69■□□□□ 0.1
ACTB-213ENST00000493945 C11orf70Q9BRQ4 267 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 SYT11Q9BT88 431 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 TTLL2Q9BWV7 592 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 SLC4A5Q9BY07 1137 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 TRPM5Q9NZQ8 1165 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 INTUQ9ULD6 942 aa15.69■□□□□ 0.1
ACTB-213ENST00000493945 ZNF638Q14966 1978 aaKnown RBP15.69■□□□□ 0.1
ACTB-213ENST00000493945 TMCO5BA8MYB1 307 aa15.68■□□□□ 0.1
ACTB-213ENST00000493945 E5RJQ4 531 aa15.68■□□□□ 0.1
ACTB-213ENST00000493945 SOAT2O75908 522 aa15.68■□□□□ 0.1
ACTB-213ENST00000493945 NDUFA10O95299 355 aa15.68■□□□□ 0.1
ACTB-213ENST00000493945 CALCAP01258 141 aa15.68■□□□□ 0.1
ACTB-213ENST00000493945 GLI1P08151 1106 aa15.68■□□□□ 0.1
ACTB-213ENST00000493945 PLEKP08567 350 aaPredicted RBP15.68■□□□□ 0.1
ACTB-213ENST00000493945 H2AFZP0C0S5 128 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms