RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TRIM49D1C9J1S8 452 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 TNNI3P19429 210 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SV2CQ496J9 727 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 COL23A1Q86Y22 540 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CAMKK1Q8N5S9 505 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 TFB1MQ8WVM0 346 aaKnown RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF668Q96K58 619 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 GPR101Q96P66 508 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC3Q9BQI4 270 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SHCBP1LQ9BZQ2 653 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 KCTD10Q9H3F6 313 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CD248Q9HCU0 757 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CYLDQ9NQC7 956 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 MIEF1Q9NQG6 463 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SLC38A7Q9NVC3 462 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 HEY2Q9UBP5 337 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 LNPEPQ9UIQ6 1025 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 NCF1BA6NI72 391 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 NCF1CA8MVU1 366 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF185O15231 689 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CHP2O43745 196 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SCGNO76038 276 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 NCF1P14598 390 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CALB2P22676 271 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 FASP25445 335 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SLC18A3Q16572 532 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ERFEQ4G0M1 354 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 EFHC1Q5JVL4 640 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SEL1L3Q68CR1 1132 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 IZUMO2Q6UXV1 221 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CCNI2Q6ZMN8 369 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 OR2W6PQ8NHA6 318 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 SLC30A5Q8TAD4 765 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 COA1Q9GZY4 146 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CMTM6Q9NX76 183 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CHKBQ9Y259 395 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 DYNC1LI2O43237 492 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 OR6B1O95007 311 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CD2BP2O95400 341 aaKnown RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 LCA5LO95447 670 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CYP2D6P10635 497 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ARF4P18085 180 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 AKR1D1P51857 326 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 NME5P56597 212 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ULK3Q6PHR2 472 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ATP6V0D2Q8N8Y2 350 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 RBBP8NLQ8NC74 664 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 C18orf25Q96B23 403 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 MAGEB18Q96M61 343 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 FAM129BQ96TA1 746 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 NLNQ9BYT8 704 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ANTXR1Q9H6X2 564 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 NRDE2Q9H7Z3 1164 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 ACAD9Q9H845 621 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 EPB41L4AQ9HCS5 686 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-221ENST00000493795 CD209Q9NNX6 404 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 GPRC5DQ9NZD1 345 aa8.12□□□□□ -1.11
BRCA1-221ENST00000493795 UTYO14607 1347 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 AP3D1O14617 1153 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TRIM66O15016 1216 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 SSNA1O43805 119 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 PARNO95453 639 aaKnown RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ENO2P09104 434 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TGM2P21980 687 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CASP1P29466 404 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CAMK1Q14012 370 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 GNA13Q14344 377 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 POLD3Q15054 466 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 DALRD3Q5D0E6 543 aaKnown RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 HLA-DQA1Q5Y7H0 255 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 LMBRD2Q68DH5 695 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TRAPPC11Q7Z392 1133 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF605Q86T29 641 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 GATAD2AQ86YP4 633 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CCNJLQ8IV13 435 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 RNF149Q8NC42 400 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 EMILIN2Q9BXX0 1053 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 OSBPL3Q9H4L5 887 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TIMM44O43615 452 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 IL18RAPO95256 599 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CYP2E1P05181 493 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ITGA3P26006 1051 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 KPNA1P52294 538 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ABATP80404 500 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 PTSQ03393 145 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CDH18Q13634 790 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TXNRD1Q16881 649 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC157Q569K6 752 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ARHGAP22Q7Z5H3 698 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 PHACTR4Q8IZ21 702 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 RIN2Q8WYP3 895 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP7Q93009 1102 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 OSBP2Q969R2 916 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 GPRASP2Q96D09 838 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 FAM111AQ96PZ2 611 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 FRMD8P1Q9BZ68 369 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 AHSPQ9NZD4 102 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF112Q9UJU3 913 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 BTBD3Q9Y2F9 522 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms