RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ZBTB39O15060 712 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 PPP4CP60510 307 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 GRB10Q13322 594 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 PRRG3Q9BZD7 231 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 PRKAA2P54646 552 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 PKN2Q16513 984 aaKnown RBP20.81■□□□□ 0.92
RNF40-203ENST00000493683 RNF112Q9ULX5 631 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 HPSEQ9Y251 543 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 CLEC16AQ2KHT3 1053 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 ATP8B4Q8TF62 1192 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 WDCPQ9H6R7 721 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 RXFP1Q9HBX9 757 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 PDE5AO76074 875 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 SUPT7LO94864 414 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 HMBSP08397 361 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 DGKDQ16760 1214 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 C19orf60Q96EN9 201 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 MRPL48Q96GC5 212 aaKnown RBP20.81■□□□□ 0.92
RNF40-203ENST00000493683 FBXO21O94952 628 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 ZBTB7AO95365 584 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 CYP2C9P11712 490 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 KRT20P35900 424 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 NAMPTP43490 491 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 CAPZA2P47755 286 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 ATXN3P54252 364 aaPredicted RBP20.81■□□□□ 0.92
RNF40-203ENST00000493683 WASHC2DQ5SRD0 308 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 CYP4A22Q5TCH4 519 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 CENPLQ8N0S6 344 aaPredicted RBP20.81■□□□□ 0.92
RNF40-203ENST00000493683 SEPT5Q99719 369 aaPredicted RBP20.81■□□□□ 0.92
RNF40-203ENST00000493683 SYTL2Q9HCH5 934 aa20.81■□□□□ 0.92
RNF40-203ENST00000493683 RNF17Q9BXT8 1623 aaKnown RBP20.8■□□□□ 0.92
RNF40-203ENST00000493683 DYNC1LI2O43237 492 aaPredicted RBP20.8■□□□□ 0.92
RNF40-203ENST00000493683 ATP6V1B1P15313 513 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 SLC11A2P49281 568 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 DPP3Q9NY33 737 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 TDRD10Q5VZ19 366 aaKnown RBP20.8■□□□□ 0.92
RNF40-203ENST00000493683 SLC22A9Q8IVM8 553 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 TARS2Q9BW92 718 aaKnown RBP20.8■□□□□ 0.92
RNF40-203ENST00000493683 USE1Q9NZ43 259 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 HAO1Q9UJM8 370 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 MSH4O15457 936 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 ALOX15P16050 662 aaPredicted RBP20.8■□□□□ 0.92
RNF40-203ENST00000493683 ZNF23P17027 643 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 ARL4DP49703 201 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 VPS33AQ96AX1 596 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 PAFAH2Q99487 392 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 SPASTQ9UBP0 616 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 CYP11B1P15538 503 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 CCDC103Q8IW40 242 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 KBTBD4Q9NVX7 518 aa20.8■□□□□ 0.92
RNF40-203ENST00000493683 FOXN3O00409 490 aaPredicted RBP20.79■□□□□ 0.92
RNF40-203ENST00000493683 NCAM2O15394 837 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 PROSCO94903 275 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 TAF1CQ15572 869 aaPredicted RBP20.79■□□□□ 0.92
RNF40-203ENST00000493683 CCDC81Q6ZN84 652 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 KRT78Q8N1N4 520 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 SRPK1Q96SB4 655 aaKnown RBP20.79■□□□□ 0.92
RNF40-203ENST00000493683 PI4K2AQ9BTU6 479 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 NCKIPSDQ9NZQ3 722 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 TMCC3Q9ULS5 477 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 QRICH2Q9H0J4 1663 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 MAGEB16A2A368 324 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 KBTBD13C9JR72 458 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 PRRG1O14668 218 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 ITGB3P05106 788 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 CYP4Z1Q86W10 505 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 GJD4Q96KN9 370 aaPredicted RBP20.79■□□□□ 0.92
RNF40-203ENST00000493683 CGRRF1Q99675 332 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 CDC42EP4Q9H3Q1 356 aaKnown RBP20.79■□□□□ 0.92
RNF40-203ENST00000493683 ZNF839A8K0R7 811 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 RPLP2P05387 115 aaKnown RBP20.79■□□□□ 0.92
RNF40-203ENST00000493683 BTKQ06187 659 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 TROAPQ12815 778 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 MMRN1Q13201 1228 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 TTI2Q6NXR4 508 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 PRMT9Q6P2P2 845 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 GJB7Q6PEY0 223 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 ZBTB12Q9Y330 459 aaPredicted RBP20.79■□□□□ 0.92
RNF40-203ENST00000493683 CAMTA2O94983 1202 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 ADAM30Q9UKF2 790 aa20.79■□□□□ 0.92
RNF40-203ENST00000493683 RUVBL2Q9Y230 463 aaKnown RBP20.79■□□□□ 0.92
RNF40-203ENST00000493683 M0QYT0 321 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 RAD23AP54725 363 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 RPS6P62753 249 aaKnown RBP20.78■□□□□ 0.92
RNF40-203ENST00000493683 OVGP1Q12889 678 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 MGAT5BQ3V5L5 792 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 ELP3Q9H9T3 547 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 CYP3A43Q9HB55 503 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 KCNMA1Q12791 1236 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 ZNF484Q5JVG2 852 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 SH2D3AQ9BRG2 576 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 SESN1Q9Y6P5 492 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 WBP4O75554 376 aaKnown RBP20.78■□□□□ 0.92
RNF40-203ENST00000493683 SGPL1O95470 568 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 ICAM1P05362 532 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 CPT1AP50416 773 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 SGO1Q5FBB7 561 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 C10orf120Q5SQS8 335 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 MICALL2Q8IY33 904 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 FAM153AQ9UHL3 310 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms