RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 MYCP01106 439 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 CXCL10P02778 98 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 PDGFRBP09619 1106 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 ATP6V1C1P21283 382 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 RFC2P35250 354 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 ASPAP45381 313 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 CLCN2P51788 898 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF132P52740 706 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 USP46P62068 366 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 FAM189BP81408 668 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 GSTM4Q03013 218 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 CKAP4Q07065 602 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 KLC1Q07866 573 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 NAB2Q15742 525 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 C9orf57Q5W0N0 161 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 PPP1R2P3Q6NXS1 205 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 SLC24A5Q71RS6 500 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF598Q86UK7 904 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 ECHDC2Q86YB7 292 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 SLC30A5Q8TAD4 765 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 EPS8L1Q8TE68 723 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 SEPT8Q92599 483 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 AZIN2Q96A70 460 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 HPDLQ96IR7 371 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 RNPC3Q96LT9 517 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 AGPAT1Q99943 283 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 TMEM106CQ9BVX2 250 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 OCEL1Q9H607 264 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 ELAC1Q9H777 363 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 RSAD1Q9HA92 442 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 RHBDL2Q9NX52 303 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 NOCTQ9UK39 431 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 R3HDM2Q9Y2K5 976 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 PCDHA13Q9Y5I0 950 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 TSC2P49815 1807 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 HTR3EA5X5Y0 456 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 TRIM43BA6NCK2 446 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 BTNL10A8MVZ5 291 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 C9IYK1 514 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 E7EVH7 732 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 PIRO00625 290 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 PTGESO14684 152 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF263O14978 683 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 KRT86O43790 486 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 MYCLP1P12525 358 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 KRT5P13647 590 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 CYP11B1P15538 503 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 TNFAIP3P21580 790 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 MAGEA1P43355 309 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 TNNC1P63316 161 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 CDR2Q01850 454 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 PLOD1Q02809 727 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 FAAP100Q0VG06 881 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 TRIM60Q495X7 471 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 SV2CQ496J9 727 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 SLC44A4Q53GD3 710 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 CCDC70Q6NSX1 233 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 TMEM53Q6P2H8 277 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 TRIM72Q6ZMU5 477 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 AGMOQ6ZNB7 445 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 OLIG1Q8TAK6 271 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 IRGQQ8WZA9 623 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 SEC16BQ96JE7 1060 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 SYT15Q9BQS2 421 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 HIPK3Q9H422 1215 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 HESX1Q9UBX0 185 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 NAGPAQ9UK23 515 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 FBXO9Q9UK97 447 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 TBX21Q9UL17 535 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 PCDHB4Q9Y5E5 795 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 UMODL1Q5DID0 1318 aa7.59□□□□□ -1.19
SMARCE1-211ENST00000493660 A0A087X0T9 212 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 CCDC162PA2VCL2 907 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 GMNCA6NCL1 334 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 DDX3XO00571 662 aaKnown RBP eCLIP7.58□□□□□ -1.23e-10■■■■□ 24
SMARCE1-211ENST00000493660 CYP26A1O43174 497 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 MAP3K13O43283 966 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 NBNO60934 754 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 THP07101 528 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 PAEPP09466 180 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 FAM228BP0C875 321 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 GZMAP12544 262 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 NR1D1P20393 614 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 RPL9P32969 192 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 TLE2Q04725 743 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 GFPT1Q06210 699 aaPredicted RBP7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 INCA1Q0VD86 236 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 NNTQ13423 1086 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 BYSLQ13895 437 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 SPRED3Q2MJR0 410 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 ZNF569Q5MCW4 686 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 IRGCQ6NXR0 463 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 TMEM154Q6P9G4 183 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 NECAB2Q7Z6G3 386 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 NOP9Q86U38 636 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 RBBP8NLQ8NC74 664 aaPredicted RBP7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 STKLD1Q8NE28 680 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 LNX1Q8TBB1 728 aaPredicted RBP7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 WDR60Q8WVS4 1066 aa7.58□□□□□ -1.2
SMARCE1-211ENST00000493660 UROC1Q96N76 676 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms